RNA–Protein interactions for RNA: ENST00000336798.11

SDC3-201, Transcript of syndecan 3, humanhuman

TSL 1 (best) BASIC

Gene SDC3, Length 6,392 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-201ENST00000336798 DHRS4Q9BTZ2 278 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 MYH1P12882 1939 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 CXCL13O43927 109 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 SULT1C4O75897 302 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 SELEP16581 610 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 CLDN15P56746 228 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 TMEM81Q6P7N7 255 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 Q6ZSR9 355 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 TMUB2Q71RG4 321 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 MED29Q9NX70 200 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 DIMT1Q9UNQ2 313 aaKnown RBP11.51□□□□□ -0.57
SDC3-201ENST00000336798 SPRY3O43610 288 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 PIAS2O75928 621 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 DDOSTP39656 456 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 DOC2BQ14184 412 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 DOK3Q7L591 496 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 SLC35B4Q969S0 331 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 S1PR3Q99500 378 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 NDRG3Q9UGV2 375 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 A0A1W2PR80 420 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 TRABD2BA6NFA1 517 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 PPP1R2P9O14990 202 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 HIST1H1CP16403 213 aaKnown RBP11.51□□□□□ -0.57
SDC3-201ENST00000336798 APOBEC1P41238 236 aaKnown RBP11.51□□□□□ -0.57
SDC3-201ENST00000336798 SNTB1Q13884 538 aaKnown RBP11.51□□□□□ -0.57
SDC3-201ENST00000336798 KIAA0141Q14154 515 aaPredicted RBP11.51□□□□□ -0.57
SDC3-201ENST00000336798 TFAP2EQ6VUC0 442 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 HIST2H3AQ71DI3 136 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 FBXO17Q96EF6 278 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 KIR3DX1Q9H7L2 352 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 FBXO8Q9NRD0 319 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 SLC22A11Q9NSA0 550 aa11.51□□□□□ -0.57
SDC3-201ENST00000336798 A0A0B4J203 849 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 ZBTB42B2RXF5 422 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 HRO43593 1189 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 ADRB1P08588 477 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 SLC25A6P12236 298 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 TMEM52BQ4KMG9 183 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 SLC51BQ86UW2 128 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 ANGPTL6Q8NI99 470 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 ING1Q9UK53 422 aaPredicted RBP11.5□□□□□ -0.57
SDC3-201ENST00000336798 SLC17A4Q9Y2C5 497 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 UBL3O95164 117 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 S100A8P05109 93 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 CPN1P15169 458 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 Q1RN00 199 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 PRSS36Q5K4E3 855 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 LAIR1Q6GTX8 287 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 OR6M1Q8NGM8 313 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 FBXO4Q9UKT5 387 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 ADAMTS5Q9UNA0 930 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 FLVCR1Q9Y5Y0 555 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 HS3ST3A1Q9Y663 406 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 MON2Q7Z3U7 1717 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 DLG5Q8TDM6 1919 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 ZNF90Q03938 601 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 PDZK1IP1Q13113 114 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 ALKAL1Q6UXT8 129 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 NLRC3Q7RTR2 1065 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 MOB3BQ86TA1 216 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 NKAIN3Q8N8D7 197 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 ATF6BQ99941 703 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 IKZF5Q9H5V7 419 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 NWD2Q9ULI1 1742 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 OR6C68A6NDL8 312 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 GALR2O43603 387 aaPredicted RBP11.5□□□□□ -0.57
SDC3-201ENST00000336798 CRYAAP02489 173 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 DUSP1P28562 367 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 RPS23P62266 143 aaKnown RBP11.5□□□□□ -0.57
SDC3-201ENST00000336798 ZNF596Q8TC21 504 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 RPUSD4Q96CM3 377 aaKnown RBP11.5□□□□□ -0.57
SDC3-201ENST00000336798 TIMM10BQ9Y5J6 103 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 ETV7Q9Y603 341 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 RICTORQ6R327 1708 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 ARFGEF2Q9Y6D5 1785 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 FPR3P25089 353 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 HENMT1Q5T8I9 393 aaKnown RBP11.5□□□□□ -0.57
SDC3-201ENST00000336798 CST9Q5W186 159 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 PLXDC2Q6UX71 529 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.5□□□□□ -0.57
SDC3-201ENST00000336798 MAGT1Q9H0U3 335 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 MYO9BQ13459 2157 aa11.5□□□□□ -0.57
SDC3-201ENST00000336798 GFRALQ6UXV0 394 aa11.49□□□□□ -0.57
SDC3-201ENST00000336798 RTL10Q7L3V2 364 aa11.49□□□□□ -0.57
SDC3-201ENST00000336798 GLCCI1Q86VQ1 547 aa11.49□□□□□ -0.57
SDC3-201ENST00000336798 PRSS35Q8N3Z0 413 aa11.49□□□□□ -0.57
SDC3-201ENST00000336798 OR1M1Q8NGA1 313 aa11.49□□□□□ -0.57
SDC3-201ENST00000336798 OR4C5Q8NGB2 326 aa11.49□□□□□ -0.57
SDC3-201ENST00000336798 OR10Z1Q8NGY1 313 aa11.49□□□□□ -0.57
SDC3-201ENST00000336798 UBALD1Q8TB05 177 aa11.49□□□□□ -0.57
SDC3-201ENST00000336798 CMBLQ96DG6 245 aa11.49□□□□□ -0.57
SDC3-201ENST00000336798 TOX2Q96NM4 488 aa11.49□□□□□ -0.57
SDC3-201ENST00000336798 SLCO5A1Q9H2Y9 848 aa11.49□□□□□ -0.57
SDC3-201ENST00000336798 LOXHD1Q8IVV2 1947 aa11.49□□□□□ -0.57
SDC3-201ENST00000336798 DCTN6O00399 190 aa11.49□□□□□ -0.57
SDC3-201ENST00000336798 LINC01565O15544 149 aa11.49□□□□□ -0.57
SDC3-201ENST00000336798 FGF17O60258 216 aa11.49□□□□□ -0.57
SDC3-201ENST00000336798 CRYBA1P05813 215 aa11.49□□□□□ -0.57
SDC3-201ENST00000336798 HAAOP46952 286 aa11.49□□□□□ -0.57
SDC3-201ENST00000336798 C4orf17Q53FE4 359 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms