RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ZNF546Q86UE3 836 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 LINC00346Q8IVM7 164 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 SVBPQ8N300 66 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 ACBD4Q8NC06 268 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 CASTOR1Q8WTX7 329 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 CCDC107Q8WV48 283 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 ZNF524Q96C55 264 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 LCORQ96JN0 433 aaPredicted RBP14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 SUCNR1Q9BXA5 334 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 FBXO4Q9UKT5 387 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 B9D1Q9UPM9 204 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 EMC9Q9Y3B6 208 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 MYO15AQ9UKN7 3530 aa14.87□□□□□ -0.03
CDC42EP4-201ENST00000335793 LOC100289279A0A1B0GTE1 492 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 CCSO14618 274 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 TERTO14746 1132 aaKnown RBP14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 MPZL1O95297 269 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 ASAH2BP0C7U1 165 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 DRD1P21728 446 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 KIR3DL2P43630 455 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 ZNF117Q03924 483 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 HYAL1Q12794 435 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 SLC17A1Q14916 467 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 ISXQ2M1V0 245 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 CCDC157Q569K6 752 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 ZNF684Q5T5D7 378 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 COMMD2Q86X83 199 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 OR13C3Q8NGS6 347 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 GTF3AQ92664 365 aaKnown RBP14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 TREM1Q9NP99 234 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 DENND4AQ7Z401 1863 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 TMEM82A0PJX8 343 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 TUBAL3A6NHL2 446 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 OR2T1O43869 369 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 PNPP00491 289 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 HPP00738 406 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 VAMP1P23763 118 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 HTR2CP28335 458 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 NUBP1P53384 320 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 EGR3Q06889 387 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 VWA2Q5GFL6 755 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 ETV3LQ6ZN32 361 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 OR5M9Q8NGP3 310 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 OR1J4Q8NGS1 313 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 ELP5Q8TE02 316 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 APMAPQ9HDC9 416 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 TRBV5-5A0A0J9YX44 114 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 EDN3P14138 238 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 ACTBP60709 375 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 ACTG1P63261 375 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 CDNFQ49AH0 187 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 GABRG1Q8N1C3 465 aa14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 GPX7Q96SL4 187 aaPredicted RBP14.86□□□□□ -0.03
CDC42EP4-201ENST00000335793 IGHV5-51A0A0C4DH38 117 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 A0A1B0GTQ1 180 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 ABHD16AO95870 558 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 PPICP45877 212 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 TDGQ13569 410 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 DEFB133Q30KQ1 61 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 TMEM71Q6P5X7 295 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 SEZ6L2Q6UXD5 910 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 ZNF679Q8IYX0 411 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 BPIFB2Q8N4F0 458 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 ZNF471Q9BX82 626 aaPredicted RBP14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 RTN4RQ9BZR6 473 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 EXOSC3Q9NQT5 275 aaKnown RBP14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 MBD2Q9UBB5 411 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 COA3Q9Y2R0 106 aaPredicted RBP14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 TMEM235A6NFC5 223 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 ZNF736B4DX44 427 aaPredicted RBP14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 S100A8P05109 93 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 ZNF14P17017 642 aaPredicted RBP14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 MRPS21P82921 87 aaKnown RBP14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 KCTD9Q7L273 389 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 SLC29A4Q7RTT9 530 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 OR4S1Q8NGB4 309 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 C5orf34Q96MH7 638 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 OR8B4Q96RC9 309 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 PIGQQ9BRB3 760 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 LRRC61Q9BV99 259 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 TLNRD1Q9H1K6 362 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 PRO1933Q9H354 126 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 MED12Q93074 2177 aa14.85□□□□□ -0.03
CDC42EP4-201ENST00000335793 PHYHO14832 338 aa14.84□□□□□ -0.03
CDC42EP4-201ENST00000335793 AHSA1O95433 338 aa14.84□□□□□ -0.03
CDC42EP4-201ENST00000335793 IL33O95760 270 aa14.84□□□□□ -0.03
CDC42EP4-201ENST00000335793 CTLA4P16410 223 aa14.84□□□□□ -0.03
CDC42EP4-201ENST00000335793 PGCP20142 388 aa14.84□□□□□ -0.03
CDC42EP4-201ENST00000335793 FBXW4P57775 412 aa14.84□□□□□ -0.03
CDC42EP4-201ENST00000335793 OR2B8PP59922 312 aa14.84□□□□□ -0.03
CDC42EP4-201ENST00000335793 SRSF3P84103 164 aaKnown RBP14.84□□□□□ -0.03
CDC42EP4-201ENST00000335793 RAB12Q6IQ22 244 aa14.84□□□□□ -0.03
CDC42EP4-201ENST00000335793 STEAP2Q8NFT2 490 aa14.84□□□□□ -0.03
CDC42EP4-201ENST00000335793 OR51A2Q8NGJ7 313 aa14.84□□□□□ -0.03
CDC42EP4-201ENST00000335793 OR6N1Q8NGY5 312 aa14.84□□□□□ -0.03
CDC42EP4-201ENST00000335793 PTPMT1Q8WUK0 201 aaPredicted RBP14.84□□□□□ -0.03
CDC42EP4-201ENST00000335793 PNPLA2Q96AD5 504 aa14.84□□□□□ -0.03
CDC42EP4-201ENST00000335793 MICU1Q9BPX6 476 aa14.84□□□□□ -0.03
CDC42EP4-201ENST00000335793 COPS7AQ9UBW8 275 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms