RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 GPM6BQ13491 265 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 MIDNQ504T8 468 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 MEX3DQ86XN8 651 aaKnown RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 TMEM102Q8N9M5 508 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 GPR32P1Q8NGA4 272 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 MAP1LC3CQ9BXW4 147 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 AMBRA1Q9C0C7 1298 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 PISDQ9UG56 409 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 SRPK3Q9UPE1 567 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 WASHC3Q9Y3C0 194 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 UBE2L5PA0A1B0GUS4 154 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 A0A1W2PNV4 684 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 DEGS1O15121 323 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 GALR2O43603 387 aaPredicted RBP5.67□□□□□ -1.5
CSMD1-201ENST00000335551 TCF21O43680 179 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 GLAP06280 429 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 RBP2P50120 134 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 ADPRHP54922 357 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 MAMDC4Q6UXC1 1216 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 FUNDC1Q8IVP5 155 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 RNF175Q8N4F7 328 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 NLGN4YQ8NFZ3 816 aaPredicted RBP5.67□□□□□ -1.5
CSMD1-201ENST00000335551 OR5D13Q8NGL4 314 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 ULBP2Q9BZM5 246 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 SLC45A1Q9Y2W3 748 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 CORINQ9Y5Q5 1042 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 MRC1P22897 1456 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 RNGTTO60942 597 aaKnown RBP5.67□□□□□ -1.5
CSMD1-201ENST00000335551 ARRB2P32121 409 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 LIPAP38571 399 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 FOXK2Q01167 660 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 CARFQ8N187 725 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 EXD3Q8N9H8 876 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 PLPP7Q8NBV4 271 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 OLIG1Q8TAK6 271 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 OR2A14Q96R47 310 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 GPR62Q9BZJ7 368 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 FTSJ1Q9UET6 329 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 POMT2Q9UKY4 750 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 NSG1A0A0A6YYJ2 146 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 DNPH1O43598 174 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 SMIM18P0DKX4 95 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 EIF1P41567 113 aaKnown RBP5.67□□□□□ -1.5
CSMD1-201ENST00000335551 RAD52P43351 418 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 B2MP61769 119 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 PSAPL1Q6NUJ1 521 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 OR10P1Q8NGE3 313 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 HGDQ93099 445 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 ZFYVE21Q9BQ24 234 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 RSG1Q9BU20 258 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 NXF2Q9GZY0 626 aaKnown RBP5.67□□□□□ -1.5
CSMD1-201ENST00000335551 AKIP1Q9NQ31 210 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 FZD1Q9UP38 647 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 INSL5Q9Y5Q6 135 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 PMS2P1A4D2B8 440 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 B4DEV8 164 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 TIMM8AO60220 97 aaPredicted RBP5.67□□□□□ -1.5
CSMD1-201ENST00000335551 COX7A2P2O60397 106 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 CRISP2P16562 243 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 SHC1P29353 583 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 B3GNTL1Q67FW5 361 aaPredicted RBP5.67□□□□□ -1.5
CSMD1-201ENST00000335551 GDF6Q6KF10 455 aaPredicted RBP5.67□□□□□ -1.5
CSMD1-201ENST00000335551 CMTM8Q8IZV2 173 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 OR5D18Q8NGL1 313 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 GABARAPL3Q9BY60 117 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 OCEL1Q9H607 264 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 KIAA1456Q9P272 454 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 OR2J3O76001 311 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 SOD1P00441 154 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 SLC16A12Q6ZSM3 486 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 ACOT4Q8N9L9 421 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 OR51F2Q8NH61 342 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 CD99L2Q8TCZ2 262 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 UCN3Q969E3 161 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 MUCL1Q96DR8 90 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 MBOAT4Q96T53 435 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 ELOVL1Q9BW60 279 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 DYNLRB1Q9NP97 96 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 C5P01031 1676 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 C7orf72A4D263 438 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 H3BVH4 76 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 HMGN2P05204 90 aaKnown RBP5.67□□□□□ -1.5
CSMD1-201ENST00000335551 IL22RA1Q8N6P7 574 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 SLC38A5Q8WUX1 472 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 HSD17B8Q92506 261 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 EDAQ92838 391 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 TMEM9BQ9NQ34 198 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 GKN1Q9NS71 199 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 A0A0J9YY10 115 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 LNP1A1A4G5 178 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 TTRP02766 147 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 EPXP11678 715 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 FABP2P12104 132 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 HRH1P35367 487 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 ERHP84090 104 aaKnown RBP5.67□□□□□ -1.5
CSMD1-201ENST00000335551 TTC32Q5I0X7 151 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 LRRC18Q8N456 261 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 OR52I2Q8NH67 350 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF426Q9BUY5 554 aa5.67□□□□□ -1.5
CSMD1-201ENST00000335551 INSL6Q9Y581 213 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms