RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ESRP2Q9H6T0 727 aaKnown RBP21.17■□□□□ 0.98
TSKU-201ENST00000333090 CSAG2Q9Y5P2 127 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 LOC107986453A0A1B0GWG9 222 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 CPED1A4D0V7 1026 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 WIPF3A6NGB9 483 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 C17orf105B2RV13 164 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 TNFRSF10CO14798 259 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 MPZL1O95297 269 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 WISP1O95388 367 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 CLPSP04118 112 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 HRH1P35367 487 aa21.17■□□□□ 0.98
TSKU-201ENST00000333090 GDF2Q9UK05 429 aaPredicted RBP21.17■□□□□ 0.98
TSKU-201ENST00000333090 MEGF11A6BM72 1044 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 FAM221BA6H8Z2 402 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 METTL21EPA6NDL7 271 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 FGF16O43320 207 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 TPT1P13693 172 aaKnown RBP21.16■□□□□ 0.98
TSKU-201ENST00000333090 RORAP35398 523 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 CBX5P45973 191 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 RPL27P61353 136 aaKnown RBP21.16■□□□□ 0.98
TSKU-201ENST00000333090 TMED6Q8WW62 240 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 ASB12Q8WXK4 309 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 AQP3Q92482 292 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 ARL11Q969Q4 196 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 MMABQ96EY8 250 aaPredicted RBP21.16■□□□□ 0.98
TSKU-201ENST00000333090 IGLV1-36A0A0B4J1U3 117 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 A0A0B4J2A0 478 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 EIF1AYO14602 144 aaKnown RBP21.16■□□□□ 0.98
TSKU-201ENST00000333090 PSMB6P28072 239 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 EIF1AXP47813 144 aaKnown RBP21.16■□□□□ 0.98
TSKU-201ENST00000333090 ZNF117Q03924 483 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 C19orf47Q8N9M1 422 aaKnown RBP21.16■□□□□ 0.98
TSKU-201ENST00000333090 USB1Q9BQ65 265 aaKnown RBP21.16■□□□□ 0.98
TSKU-201ENST00000333090 ADAM19Q9H013 955 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 TREM1Q9NP99 234 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 SHPKQ9UHJ6 478 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 LHX6Q9UPM6 363 aa21.16■□□□□ 0.98
TSKU-201ENST00000333090 IL33O95760 270 aa21.15■□□□□ 0.98
TSKU-201ENST00000333090 CRHP06850 196 aa21.15■□□□□ 0.98
TSKU-201ENST00000333090 PPICP45877 212 aa21.15■□□□□ 0.98
TSKU-201ENST00000333090 ARRB1P49407 418 aaPredicted RBP21.15■□□□□ 0.98
TSKU-201ENST00000333090 AIMP2Q13155 320 aaKnown RBP21.15■□□□□ 0.98
TSKU-201ENST00000333090 PRTGQ2VWP7 1150 aa21.15■□□□□ 0.98
TSKU-201ENST00000333090 ZNF260Q3ZCT1 412 aa21.15■□□□□ 0.98
TSKU-201ENST00000333090 Q6ZSR6 202 aa21.15■□□□□ 0.98
TSKU-201ENST00000333090 ZDHHC22Q8N966 263 aa21.15■□□□□ 0.98
TSKU-201ENST00000333090 S1PR5Q9H228 398 aa21.15■□□□□ 0.98
TSKU-201ENST00000333090 RAB27BO00194 218 aa21.15■□□□□ 0.98
TSKU-201ENST00000333090 NKAPLQ5M9Q1 402 aa21.15■□□□□ 0.98
TSKU-201ENST00000333090 MAMDC2Q7Z304 686 aaPredicted RBP21.15■□□□□ 0.98
TSKU-201ENST00000333090 BAP18Q8IXM2 172 aa21.15■□□□□ 0.98
TSKU-201ENST00000333090 TRAV36DV7A0A075B6V5 113 aa21.14■□□□□ 0.98
TSKU-201ENST00000333090 ICOSLGO75144 302 aa21.14■□□□□ 0.98
TSKU-201ENST00000333090 SERPINF1P36955 418 aa21.14■□□□□ 0.98
TSKU-201ENST00000333090 OR52N5Q8NH56 324 aa21.14■□□□□ 0.98
TSKU-201ENST00000333090 ELP5Q8TE02 316 aa21.14■□□□□ 0.98
TSKU-201ENST00000333090 NUDT21O43809 227 aaKnown RBP21.14■□□□□ 0.97
TSKU-201ENST00000333090 KLF8O95600 359 aaPredicted RBP21.14■□□□□ 0.97
TSKU-201ENST00000333090 NPBWR1P48145 328 aa21.14■□□□□ 0.97
TSKU-201ENST00000333090 DHRS7BQ6IAN0 325 aaPredicted RBP21.14■□□□□ 0.97
TSKU-201ENST00000333090 RNF141Q8WVD5 230 aa21.14■□□□□ 0.97
TSKU-201ENST00000333090 CNTNAP3BQ96NU0 1288 aa21.14■□□□□ 0.97
TSKU-201ENST00000333090 PNO1Q9NRX1 252 aaKnown RBP21.14■□□□□ 0.97
TSKU-201ENST00000333090 EFSO43281 561 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 RFC3P40938 356 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 ZNF528Q3MIS6 628 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 PHF19Q5T6S3 580 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 TMPPEQ6ZT21 453 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 STOML3Q8TAV4 291 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 ZNF519Q8TB69 540 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 C2CD4CQ8TF44 421 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 GAL3ST4Q96RP7 486 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 GAS2L1Q99501 681 aaPredicted RBP21.13■□□□□ 0.97
TSKU-201ENST00000333090 MICU1Q9BPX6 476 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 OR8D2Q9GZM6 311 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 IFT22Q9H7X7 185 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 CNTD2Q9H8S5 307 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 COA3Q9Y2R0 106 aaPredicted RBP21.13■□□□□ 0.97
TSKU-201ENST00000333090 CDC14CA4D256 554 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 IFNA6P05013 189 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 TNFRSF4P43489 277 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 PNLIPRP2P54317 469 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 HHEXQ03014 270 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 C1orf100Q5SVJ3 147 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 OR4A4PQ8NGN8 299 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 GABRG3Q99928 467 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 TMEM184BQ9Y519 407 aaPredicted RBP21.13■□□□□ 0.97
TSKU-201ENST00000333090 R4GMQ9 66 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 BRWD1Q9NSI6 2320 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 ARPC4-TTLL3A0A0A6YYG9 625 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 DUS4LO95620 317 aaKnown RBP21.13■□□□□ 0.97
TSKU-201ENST00000333090 CD37P11049 281 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 BIN3Q9NQY0 253 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 OR52A1Q9UKL2 312 aa21.13■□□□□ 0.97
TSKU-201ENST00000333090 CARHSP1Q9Y2V2 147 aaKnown RBP21.13■□□□□ 0.97
TSKU-201ENST00000333090 TEX13DA0A0J9YY54 714 aaPredicted RBP21.12■□□□□ 0.97
TSKU-201ENST00000333090 LOC101059948A0A1B0GTJ6 334 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 F8VVB4 439 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 F8VWA3 439 aa21.12■□□□□ 0.97
TSKU-201ENST00000333090 CD79AP11912 226 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms