RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 NPTNQ9Y639 398 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 HS3ST3B1Q9Y662 390 aa13.21□□□□□ -0.29
CLCNKA-201ENST00000331433 CCL3P10147 92 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 ZNF43P17038 809 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 GNALP38405 381 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 CSRP2Q16527 193 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 MOGAT2Q3SYC2 334 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 ADGRE4PQ86SQ3 457 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 ADPRHL1Q8NDY3 354 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 OR51S1Q8NGJ8 323 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 ADAT3Q96EY9 351 aaPredicted RBP13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 IMMP1LQ96LU5 166 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 MGAT4CQ9UBM8 478 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 SULT2B1O00204 365 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 VSIG10L2P0DP72 767 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 CD37P11049 281 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 SLC2A1P11166 492 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 SSTR2P30874 369 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 RBMS2Q15434 407 aaKnown RBP13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 MEIOBQ8N635 442 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 OR8H1Q8NGG4 311 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 GNRHR2Q96P88 292 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 UTP23Q9BRU9 249 aaKnown RBP13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 SMOC1Q9H4F8 434 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 TAS2R8Q9NYW2 309 aa13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 EIF3KQ9UBQ5 218 aaKnown RBP13.2□□□□□ -0.3
CLCNKA-201ENST00000331433 MEGF11A6BM72 1044 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 SYT7O43581 403 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 CREBL2O60519 120 aaPredicted RBP13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 RLN1P04808 185 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 ANOS1P23352 680 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 EIF1P41567 113 aaKnown RBP13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 PRKXP51817 358 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 GPR85P60893 370 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 ZFP36L1Q07352 338 aaKnown RBP13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 LYPD6Q86Y78 171 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 ELMOD2Q8IZ81 293 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 CLEC1AQ8NC01 280 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 GPX8Q8TED1 209 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 NKD1Q969G9 470 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 SEH1LQ96EE3 360 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 OXGR1Q96P68 337 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 CDCP1Q9H5V8 836 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 ASH2LQ9UBL3 628 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 RHBDD3Q9Y3P4 386 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 NCOA6Q14686 2063 aaPredicted RBP13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 C9J4A7 227 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 LDLRAD4O15165 306 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 ALX3O95076 343 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 CYC1P08574 325 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 AKAIN1P0CW23 69 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 GABRA1P14867 456 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 LPAL2Q16609 132 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 LGALSLQ3ZCW2 172 aaPredicted RBP13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 ZNF626Q68DY1 528 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 ZNF767PQ75MW2 155 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 OR52N4Q8NGI2 321 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 OR1J2Q8NGS2 313 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 OR6X1Q8NH79 312 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 SLC25A43Q8WUT9 341 aaPredicted RBP13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 WDR89Q96FK6 387 aaPredicted RBP13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 JSRP1Q96MG2 331 aaPredicted RBP13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 SOX7Q9BT81 388 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 ZNF700Q9H0M5 742 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 CNTD2Q9H8S5 307 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 PTTG3PQ9NZH4 202 aa13.19□□□□□ -0.3
CLCNKA-201ENST00000331433 LOC390937A0A1W2PQ73 354 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 AQP7P3A6NL99 342 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 RER1O15258 196 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 QDPRP09417 244 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 ZNF81P51508 661 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 PER3P56645 1201 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 TOMM20Q15388 145 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 C1orf100Q5SVJ3 147 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 PEAR1Q5VY43 1037 aaPredicted RBP13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 ZNF813Q6ZN06 617 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 ACBD4Q8NC06 268 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 OR2AJ1Q8NGZ0 328 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 OR51E1Q8TCB6 317 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 B3GNT4Q9C0J1 378 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 PISDQ9UG56 409 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 HDGFL3Q9Y3E1 203 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 CER1O95813 267 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 ADH6P28332 368 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 HSD11B1P28845 292 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 BDKRB2P30411 391 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 MECP2P51608 486 aaKnown RBP13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 CLDN6P56747 220 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 PMPCAQ10713 525 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 STEAP1BQ6NZ63 245 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 SLC25A47Q6Q0C1 308 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 OPN5Q6U736 354 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 TMPPEQ6ZT21 453 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 GABRG1Q8N1C3 465 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 NKAIN3Q8N8D7 197 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 OR13C9Q8NGT0 318 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 ZBTB8AQ96BR9 441 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 MED30Q96HR3 178 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 HEXA-AS1Q9H8Q6 139 aa13.18□□□□□ -0.3
CLCNKA-201ENST00000331433 PROK2Q9HC23 129 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms