RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 DBX1A6NMT0 343 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 GPR75O95800 540 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 ERCC1P07992 297 aaPredicted RBP16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 HOXC4P09017 264 aaPredicted RBP16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 AKR1C3P42330 323 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 SLC6A9P48067 706 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 RNF44Q7L0R7 432 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 SLC39A7Q92504 469 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 C3orf49Q96BT1 292 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 INTS14Q96SY0 518 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 TAS2R4Q9NYW5 299 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 SLC22A13Q9Y226 551 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 HIF3AQ9Y2N7 669 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 TMEM14AQ9Y6G1 99 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 A0A0A6YYH2 397 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 A6NJ64 397 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 C9JQL5 133 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 EFSO43281 561 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 CLN5O75503 358 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 GPANK1O95872 356 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 CD5P06127 495 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 AKR1C4P17516 323 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 GRK6P43250 576 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 LPAR6P43657 344 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 PSG6Q00889 435 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 ALG10Q5BKT4 473 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 TMEM31Q5JXX7 168 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 PHF19Q5T6S3 580 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 TMEM244Q5VVB8 128 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 FBXO42Q6P3S6 717 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 FDX2Q6P4F2 183 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 HOXB13Q92826 284 aaPredicted RBP16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 TM4SF19Q96DZ7 209 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 ZNF587Q96SQ5 575 aaPredicted RBP16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 CDC6Q99741 560 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 PAPOLGQ9BWT3 736 aaKnown RBP16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 ASH2LQ9UBL3 628 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 KCNG2Q9UJ96 466 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 GTF2A1LQ9UNN4 478 aa16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 MRPS18BQ9Y676 258 aaKnown RBP16.25■□□□□ 0.19
CLSTN3-202ENST00000331148 LDLRAD4O15165 306 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 MT-ND4LP03901 98 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 F13BP05160 661 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 HNRNPA2B1P22626 353 aaKnown RBP16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 CX3CR1P49238 355 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 MESTQ5EB52 335 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 FJX1Q86VR8 437 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 C10orf53Q8N6V4 93 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 CTHRC1Q96CG8 243 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 SCARF2Q96GP6 870 aaPredicted RBP16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 ZC3H10Q96K80 434 aaKnown RBP16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 ELOVL3Q9HB03 270 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 CACFD1Q9UGQ2 172 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 CA14Q9ULX7 337 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 DHDHQ9UQ10 334 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 MRPS2Q9Y399 296 aaKnown RBP16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 WIF1Q9Y5W5 379 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 COLEC10Q9Y6Z7 277 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 FAM157AC9JC47 383 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 MFNGO00587 321 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 IGHV2-5P01817 119 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 ST6GAL1P15907 406 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 ZNF14P17017 642 aaPredicted RBP16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 ZNF141Q15928 474 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 FAM76BQ5HYJ3 339 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 AWAT2Q6E213 333 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 DHRS11Q6UWP2 260 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 DGAT2L6Q6ZPD8 337 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 PRSS41Q7RTY9 318 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 TRAPPC6BQ86SZ2 158 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 ACBD4Q8NC06 268 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 NECAB3Q96P71 396 aaPredicted RBP16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 MOGAT1Q96PD6 335 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 OR2A5Q96R48 311 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 CMKLR1Q99788 373 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 NUDT9Q9BW91 350 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 LYRM4Q9HD34 91 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 CKLFQ9UBR5 152 aa16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 MRPS33Q9Y291 106 aaKnown RBP16.24■□□□□ 0.19
CLSTN3-202ENST00000331148 PRR19A6NJB7 356 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 WRBO00258 174 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 PHYHO14832 338 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 TXNDC12O95881 172 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 OR8U8P0C7N1 319 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 FOSL2P15408 326 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 CD80P33681 288 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 EIF2B1Q14232 305 aaKnown RBP16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 GPR18Q14330 331 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 ZNF74Q16587 644 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 Q7L0L9 218 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 RNF128Q8TEB7 428 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 ROBO4Q8WZ75 1007 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 AQP3Q92482 292 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 PPP1R14AQ96A00 147 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 BMFQ96LC9 184 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 SULT4A1Q9BR01 284 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 KIR3DX1Q9H7L2 352 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 LMAN1LQ9HAT1 526 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 FGF22Q9HCT0 170 aa16.23■□□□□ 0.19
CLSTN3-202ENST00000331148 OR2S2Q9NQN1 319 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms