RNA–Protein interactions for RNA: ENST00000330891.9

BEST3-202, Transcript of bestrophin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BEST3, Length 3,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-202ENST00000330891 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.33□□□□□ -1.4
BEST3-202ENST00000330891 SMIM3Q9BZL3 60 aa6.33□□□□□ -1.4
BEST3-202ENST00000330891 WWTR1Q9GZV5 400 aa6.33□□□□□ -1.4
BEST3-202ENST00000330891 PARP12Q9H0J9 701 aaKnown RBP6.33□□□□□ -1.4
BEST3-202ENST00000330891 TAS2R8Q9NYW2 309 aa6.33□□□□□ -1.4
BEST3-202ENST00000330891 SPTA1P02549 2419 aa6.33□□□□□ -1.4
BEST3-202ENST00000330891 LOC107986453A0A1B0GWG9 222 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 ANKRD20A5PA0PJZ0 165 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 C5orf63A6NC05 138 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 PMP2P02689 132 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 PRH1P02810 166 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 PTBP1P26599 531 aaKnown RBP eCLIP6.32□□□□□ -1.4
BEST3-202ENST00000330891 ZNF41P51814 821 aaPredicted RBP6.32□□□□□ -1.4
BEST3-202ENST00000330891 DNM1P34Q6PK57 102 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 UNQ9370/PRO34162Q6UXP9 181 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 GLDNQ6ZMI3 551 aaPredicted RBP6.32□□□□□ -1.4
BEST3-202ENST00000330891 SMRP1Q8NCR6 262 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 OR52N4Q8NGI2 321 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 STT3BQ8TCJ2 826 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 ROBO4Q8WZ75 1007 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 DCUN1D4Q92564 292 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 ADIPOR1Q96A54 375 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 CDCA3Q99618 268 aaPredicted RBP6.32□□□□□ -1.4
BEST3-202ENST00000330891 PPP4R1LQ9P1A2 415 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 RALGAPA1Q6GYQ0 2036 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 TLCD2A6NGC4 264 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 CCDC85CA6NKD9 419 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 TMEM212A6NML5 194 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 FADS1O60427 444 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 CFIP05156 583 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 LPLP06858 475 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 HOXB5P09067 269 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 RPL27P61353 136 aaKnown RBP6.32□□□□□ -1.4
BEST3-202ENST00000330891 SEC61A1P61619 476 aaKnown RBP6.32□□□□□ -1.4
BEST3-202ENST00000330891 NR0B2Q15466 257 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 AANATQ16613 207 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 SWI5Q1ZZU3 235 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 ZNF684Q5T5D7 378 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 ZNF704Q6ZNC4 412 aaPredicted RBP6.32□□□□□ -1.4
BEST3-202ENST00000330891 TMUB2Q71RG4 321 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 TRAPPC6BQ86SZ2 158 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 LRRC18Q8N456 261 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 TOMM40LQ969M1 308 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 SLC41A2Q96JW4 573 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 ZNF75AQ96N20 296 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 OR6C1Q96RD1 312 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 NICN1Q9BSH3 213 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 SLC5A6Q9Y289 635 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 RHBDD3Q9Y3P4 386 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 CACNA1DQ01668 2161 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 A0A0B4J2A0 478 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 TRBV11-1A0A0K0K1C0 115 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 SLC22A23A1A5C7 686 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 VSTM2BA6NLU5 285 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 SDCBPO00560 298 aaPredicted RBP6.32□□□□□ -1.4
BEST3-202ENST00000330891 ACSM4P0C7M7 580 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 GALP22466 123 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 FOXF1Q12946 379 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 PDCD1Q15116 288 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 TUSC1Q2TAM9 212 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 BRICD5Q6PL45 260 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 SLC25A45Q8N413 288 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 RNASE11Q8TAA1 199 aaKnown RBP6.32□□□□□ -1.4
BEST3-202ENST00000330891 OR51E1Q8TCB6 317 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 ASB5Q8WWX0 329 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 TMEM234Q8WY98 164 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 SLC46A1Q96NT5 459 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 POLE3Q9NRF9 147 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 SHPKQ9UHJ6 478 aa6.32□□□□□ -1.4
BEST3-202ENST00000330891 LAMA5O15230 3695 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 TRAV36DV7A0A075B6V5 113 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 CCDC163A0A0D9SF12 145 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 B8ZZF3 427 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 RER1O15258 196 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 FBXO24O75426 580 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 BGLAPP02818 100 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 HOXC4P09017 264 aaPredicted RBP6.31□□□□□ -1.4
BEST3-202ENST00000330891 AMY2BP19961 511 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 EMP2P54851 167 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 HSD11B2P80365 405 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 DYRK1AQ13627 763 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 MANEAQ5SRI9 462 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 GPR139Q6DWJ6 353 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 PTCRAQ6ISU1 281 aaPredicted RBP6.31□□□□□ -1.4
BEST3-202ENST00000330891 TMEM88Q6PEY1 159 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 HAGHLQ6PII5 290 aaPredicted RBP6.31□□□□□ -1.4
BEST3-202ENST00000330891 TMEM17Q86X19 198 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 CCDC36Q8IYA8 594 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 TMEM156Q8N614 296 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 EXD3Q8N9H8 876 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 OR10G3Q8NGC4 313 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 SLC25A28Q96A46 364 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 FAM131CQ96AQ9 280 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 OR8B4Q96RC9 309 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 RBM24Q9BX46 236 aaKnown RBP6.31□□□□□ -1.4
BEST3-202ENST00000330891 CST11Q9H112 138 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 TMEM231Q9H6L2 316 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 SLC2A4RGQ9NR83 387 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 ROS1P08922 2347 aa6.31□□□□□ -1.4
BEST3-202ENST00000330891 CFAP47Q6ZTR5 3102 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms