RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 DBPQ10586 325 aaPredicted RBP23.54■■□□□ 1.36
ATPAF1-201ENST00000329231 TMEM255AQ5JRV8 349 aa23.54■■□□□ 1.36
ATPAF1-201ENST00000329231 FAM209AQ5JX71 171 aa23.54■■□□□ 1.36
ATPAF1-201ENST00000329231 HIPK1Q86Z02 1210 aa23.54■■□□□ 1.36
ATPAF1-201ENST00000329231 CYB561A3Q8NBI2 242 aa23.54■■□□□ 1.36
ATPAF1-201ENST00000329231 PROKR2Q8NFJ6 384 aa23.54■■□□□ 1.36
ATPAF1-201ENST00000329231 MSI2Q96DH6 328 aaKnown RBP23.54■■□□□ 1.36
ATPAF1-201ENST00000329231 FEVQ99581 238 aa23.54■■□□□ 1.36
ATPAF1-201ENST00000329231 TMEM160Q9NX00 188 aa23.54■■□□□ 1.36
ATPAF1-201ENST00000329231 KCNG2Q9UJ96 466 aa23.54■■□□□ 1.36
ATPAF1-201ENST00000329231 KLHL21Q9UJP4 597 aa23.54■■□□□ 1.36
ATPAF1-201ENST00000329231 LOC100289279A0A1B0GTE1 492 aa23.53■■□□□ 1.36
ATPAF1-201ENST00000329231 SPRY3O43610 288 aa23.53■■□□□ 1.36
ATPAF1-201ENST00000329231 TIMM8AO60220 97 aaPredicted RBP23.53■■□□□ 1.36
ATPAF1-201ENST00000329231 PSG7Q13046 419 aa23.53■■□□□ 1.36
ATPAF1-201ENST00000329231 TRIP10Q15642 601 aa23.53■■□□□ 1.36
ATPAF1-201ENST00000329231 TSTQ16762 297 aaKnown RBP23.53■■□□□ 1.36
ATPAF1-201ENST00000329231 ZNF362Q5T0B9 420 aaPredicted RBP23.53■■□□□ 1.36
ATPAF1-201ENST00000329231 FAM166AQ6J272 317 aa23.53■■□□□ 1.36
ATPAF1-201ENST00000329231 SLC18B1Q6NT16 456 aa23.53■■□□□ 1.36
ATPAF1-201ENST00000329231 SLC37A3Q8NCC5 494 aa23.53■■□□□ 1.36
ATPAF1-201ENST00000329231 NIPSNAP1Q9BPW8 284 aa23.53■■□□□ 1.36
ATPAF1-201ENST00000329231 SAP30LQ9HAJ7 183 aa23.53■■□□□ 1.36
ATPAF1-201ENST00000329231 ARMC1Q9NVT9 282 aa23.53■■□□□ 1.36
ATPAF1-201ENST00000329231 STARD10Q9Y365 291 aa23.53■■□□□ 1.36
ATPAF1-201ENST00000329231 RP2O75695 350 aa23.52■■□□□ 1.36
ATPAF1-201ENST00000329231 CIB2O75838 187 aa23.52■■□□□ 1.36
ATPAF1-201ENST00000329231 IGHV1-46P01743 117 aa23.52■■□□□ 1.36
ATPAF1-201ENST00000329231 DBHP09172 617 aa23.52■■□□□ 1.36
ATPAF1-201ENST00000329231 ZNF823P16415 610 aa23.52■■□□□ 1.36
ATPAF1-201ENST00000329231 CRYBB2P43320 205 aa23.52■■□□□ 1.36
ATPAF1-201ENST00000329231 LINC00346Q8IVM7 164 aa23.52■■□□□ 1.36
ATPAF1-201ENST00000329231 OR5L1Q8NGL2 311 aa23.52■■□□□ 1.36
ATPAF1-201ENST00000329231 OR4Q3Q8NH05 313 aa23.52■■□□□ 1.36
ATPAF1-201ENST00000329231 TEX47Q8TBZ9 253 aa23.52■■□□□ 1.36
ATPAF1-201ENST00000329231 DIRC2Q96SL1 478 aa23.52■■□□□ 1.36
ATPAF1-201ENST00000329231 PITX2Q99697 317 aa23.52■■□□□ 1.36
ATPAF1-201ENST00000329231 POFUT1Q9H488 388 aa23.52■■□□□ 1.36
ATPAF1-201ENST00000329231 DNAJB9Q9UBS3 223 aa23.52■■□□□ 1.36
ATPAF1-201ENST00000329231 CYB5R1Q9UHQ9 305 aa23.52■■□□□ 1.36
ATPAF1-201ENST00000329231 ZDHHC8Q9ULC8 765 aa23.52■■□□□ 1.36
ATPAF1-201ENST00000329231 KCNS2Q9ULS6 477 aa23.52■■□□□ 1.36
ATPAF1-201ENST00000329231 IGHV1-69-2A0A0G2JMI3 117 aa23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 ZSCAN5BA6NJL1 495 aa23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 PPIHO43447 177 aaKnown RBP23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 LMX1BO60663 402 aa23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 CDC14BO60729 498 aa23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 IFNGP01579 166 aa23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 ADH4P08319 380 aa23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 PYCR1P32322 319 aa23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 GGT2P36268 569 aa23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 ECH1Q13011 328 aa23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 CHRFAM7AQ494W8 412 aa23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 PTP4A1Q93096 173 aa23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 APOBEC3DQ96AK3 386 aaPredicted RBP23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 CMBLQ96DG6 245 aa23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 RBM4Q9BWF3 364 aaKnown RBP23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 EGLN1Q9GZT9 426 aa23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 MRPL22Q9NWU5 206 aaKnown RBP23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 PDP1Q9P0J1 537 aaPredicted RBP23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 PURGQ9UJV8 347 aaKnown RBP23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 CDC42EP3Q9UKI2 254 aa23.51■■□□□ 1.35
ATPAF1-201ENST00000329231 E2F6O75461 281 aa23.5■■□□□ 1.35
ATPAF1-201ENST00000329231 KITLGP21583 273 aa23.5■■□□□ 1.35
ATPAF1-201ENST00000329231 CFAP77Q6ZQR2 320 aa23.5■■□□□ 1.35
ATPAF1-201ENST00000329231 USP51Q70EK9 711 aa23.5■■□□□ 1.35
ATPAF1-201ENST00000329231 TMEM179BQ7Z7N9 219 aa23.5■■□□□ 1.35
ATPAF1-201ENST00000329231 PRIMA1Q86XR5 153 aa23.5■■□□□ 1.35
ATPAF1-201ENST00000329231 HAVCR1Q96D42 359 aa23.5■■□□□ 1.35
ATPAF1-201ENST00000329231 ELMOD3Q96FG2 381 aa23.5■■□□□ 1.35
ATPAF1-201ENST00000329231 JMJD1CQ15652 2540 aa23.5■■□□□ 1.35
ATPAF1-201ENST00000329231 RIIAD1A6NNX1 92 aa23.49■■□□□ 1.35
ATPAF1-201ENST00000329231 H3BN98 237 aa23.49■■□□□ 1.35
ATPAF1-201ENST00000329231 TGFAP01135 160 aa23.49■■□□□ 1.35
ATPAF1-201ENST00000329231 IL2RGP31785 369 aa23.49■■□□□ 1.35
ATPAF1-201ENST00000329231 SLC25A1P53007 311 aa23.49■■□□□ 1.35
ATPAF1-201ENST00000329231 CCNIQ14094 377 aa23.49■■□□□ 1.35
ATPAF1-201ENST00000329231 CRMP1Q14194 572 aa23.49■■□□□ 1.35
ATPAF1-201ENST00000329231 OR9Q1Q8NGQ5 310 aa23.49■■□□□ 1.35
ATPAF1-201ENST00000329231 UTP4Q969X6 686 aaKnown RBP23.49■■□□□ 1.35
ATPAF1-201ENST00000329231 ATF6BQ99941 703 aa23.49■■□□□ 1.35
ATPAF1-201ENST00000329231 SOX7Q9BT81 388 aa23.49■■□□□ 1.35
ATPAF1-201ENST00000329231 MSL2Q9HCI7 577 aa23.49■■□□□ 1.35
ATPAF1-201ENST00000329231 DEAF1O75398 565 aaPredicted RBP23.48■■□□□ 1.35
ATPAF1-201ENST00000329231 TIPRLO75663 272 aa23.48■■□□□ 1.35
ATPAF1-201ENST00000329231 RAC2P15153 192 aa23.48■■□□□ 1.35
ATPAF1-201ENST00000329231 ZNF3P17036 446 aa23.48■■□□□ 1.35
ATPAF1-201ENST00000329231 HFEQ30201 348 aa23.48■■□□□ 1.35
ATPAF1-201ENST00000329231 OR51L1Q8NGJ5 315 aa23.48■■□□□ 1.35
ATPAF1-201ENST00000329231 DUS3LQ96G46 650 aaKnown RBP23.48■■□□□ 1.35
ATPAF1-201ENST00000329231 NMNAT2Q9BZQ4 307 aa23.48■■□□□ 1.35
ATPAF1-201ENST00000329231 ZNF556Q9HAH1 456 aa23.48■■□□□ 1.35
ATPAF1-201ENST00000329231 CMC2Q9NRP2 79 aa23.48■■□□□ 1.35
ATPAF1-201ENST00000329231 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.48■■□□□ 1.35
ATPAF1-201ENST00000329231 LPAR3Q9UBY5 353 aa23.48■■□□□ 1.35
ATPAF1-201ENST00000329231 CD55P08174 381 aa23.47■■□□□ 1.35
ATPAF1-201ENST00000329231 FMO3P31513 532 aa23.47■■□□□ 1.35
ATPAF1-201ENST00000329231 KRTAP27-1Q3LI81 207 aa23.47■■□□□ 1.35
ATPAF1-201ENST00000329231 FBXW12Q6X9E4 464 aa23.47■■□□□ 1.35
ATPAF1-201ENST00000329231 LINC01356Q8N9X3 169 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms