RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 CLUP10909 449 aa12.71□□□□□ -0.37
CLRN1-203ENST00000328863 DAPP51397 102 aa12.71□□□□□ -0.37
CLRN1-203ENST00000328863 CRISP1P54107 249 aa12.71□□□□□ -0.37
CLRN1-203ENST00000328863 CDK5Q00535 292 aa12.71□□□□□ -0.37
CLRN1-203ENST00000328863 DBPQ10586 325 aaPredicted RBP12.71□□□□□ -0.37
CLRN1-203ENST00000328863 CARTPTQ16568 116 aa12.71□□□□□ -0.37
CLRN1-203ENST00000328863 PLBD1Q6P4A8 553 aa12.71□□□□□ -0.37
CLRN1-203ENST00000328863 TMEM154Q6P9G4 183 aa12.71□□□□□ -0.37
CLRN1-203ENST00000328863 LRP11Q86VZ4 500 aa12.71□□□□□ -0.37
CLRN1-203ENST00000328863 OR5L1Q8NGL2 311 aa12.71□□□□□ -0.37
CLRN1-203ENST00000328863 KLF14Q8TD94 323 aaPredicted RBP12.71□□□□□ -0.37
CLRN1-203ENST00000328863 SLC7A6Q92536 515 aa12.71□□□□□ -0.37
CLRN1-203ENST00000328863 SPTSSAQ969W0 71 aa12.71□□□□□ -0.37
CLRN1-203ENST00000328863 MARS2Q96GW9 593 aaKnown RBP12.71□□□□□ -0.37
CLRN1-203ENST00000328863 INTS14Q96SY0 518 aa12.71□□□□□ -0.37
CLRN1-203ENST00000328863 CYSLTR2Q9NS75 346 aa12.71□□□□□ -0.37
CLRN1-203ENST00000328863 GRIP1Q9Y3R0 1128 aa12.71□□□□□ -0.37
CLRN1-203ENST00000328863 IGHV4-30-2A0A087WSY4 118 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 ZNF878C9JN71 531 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 RNF223E7ERA6 249 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 SMAD7O15105 426 aaKnown RBP12.7□□□□□ -0.38
CLRN1-203ENST00000328863 LY6HO94772 140 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 CLPTM1O96005 669 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 IGHV3-13P01766 116 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 LIPAP38571 399 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 RPS7P62081 194 aaKnown RBP12.7□□□□□ -0.38
CLRN1-203ENST00000328863 PCGF3Q3KNV8 242 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 ALKBH6Q3KRA9 238 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 LINC01590Q5TEZ4 76 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 LCN1P1Q5VSP4 162 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 KDM4DQ6B0I6 523 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 ACSM5Q6NUN0 579 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 LYPD4Q6UWN0 246 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 ERI1Q8IV48 349 aaKnown RBP12.7□□□□□ -0.38
CLRN1-203ENST00000328863 OR6N2Q8NGY6 317 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 APOBEC3DQ96AK3 386 aaPredicted RBP12.7□□□□□ -0.38
CLRN1-203ENST00000328863 RBM4BQ9BQ04 359 aaKnown RBP12.7□□□□□ -0.38
CLRN1-203ENST00000328863 COPS4Q9BT78 406 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 OR51V1Q9H2C8 321 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 MED20Q9H944 212 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 HINT3Q9NQE9 182 aaKnown RBP12.7□□□□□ -0.38
CLRN1-203ENST00000328863 DDX28Q9NUL7 540 aaKnown RBP12.7□□□□□ -0.38
CLRN1-203ENST00000328863 RTTNQ86VV8 2226 aa12.7□□□□□ -0.38
CLRN1-203ENST00000328863 LOC390937A0A1W2PQ73 354 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 SAC3D1A6NKF1 404 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 C17orf100A8MU93 164 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 TIMM8AO60220 97 aaPredicted RBP12.69□□□□□ -0.38
CLRN1-203ENST00000328863 NGFP01138 241 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 DBHP09172 617 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 NAT2P11245 290 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 DAOP14920 347 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 GSTT1P30711 240 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 MPV17P39210 176 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 RPS27P42677 84 aaKnown RBP12.69□□□□□ -0.38
CLRN1-203ENST00000328863 PTGES3Q15185 160 aaKnown RBP12.69□□□□□ -0.38
CLRN1-203ENST00000328863 SNAPC1Q16533 368 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 KLHL12Q53G59 568 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 TEX30Q5JUR7 227 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 SLC35D3Q5M8T2 416 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 TMEM236Q5W0B7 351 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 CXXC5Q7LFL8 322 aaKnown RBP12.69□□□□□ -0.38
CLRN1-203ENST00000328863 DCXRQ7Z4W1 244 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 CIARTQ8N365 385 aaPredicted RBP12.69□□□□□ -0.38
CLRN1-203ENST00000328863 ZNF511Q8NB15 262 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 C10orf105Q8TEF2 133 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 ZNRF4Q8WWF5 429 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 STMN2Q93045 179 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 MAP6Q96JE9 813 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 CIB1Q99828 191 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 HCAR1Q9BXC0 346 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 REG4Q9BYZ8 158 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 WDR76Q9H967 626 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 PNRC2Q9NPJ4 139 aaKnown RBP12.69□□□□□ -0.38
CLRN1-203ENST00000328863 TVP23BQ9NYZ1 205 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 ORC6Q9Y5N6 252 aa12.69□□□□□ -0.38
CLRN1-203ENST00000328863 ACANP16112 2415 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 F5H5K5 113 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 H3BNX3 289 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 M0R135 149 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 SLC6A9P48067 706 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 TPTEP56180 551 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 PPP2R2BQ00005 443 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 TAF13Q15543 124 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 PCK2Q16822 640 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 SLX4IPQ5VYV7 408 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 SHFQ7M4L6 423 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 ZCCHC24Q8N2G6 241 aaKnown RBP12.68□□□□□ -0.38
CLRN1-203ENST00000328863 ZNF540Q8NDQ6 660 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 UBASH3BQ8TF42 649 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 SLAMF6Q96DU3 332 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 ZNF799Q96GE5 643 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 PKP2Q99959 881 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 GABARAPL3Q9BY60 117 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 TANC2Q9HCD6 1990 aa12.68□□□□□ -0.38
CLRN1-203ENST00000328863 MAP1AP78559 2803 aaPredicted RBP12.68□□□□□ -0.38
CLRN1-203ENST00000328863 ZAR1LA6NP61 321 aa12.67□□□□□ -0.38
CLRN1-203ENST00000328863 ZNF593O00488 134 aaPredicted RBP12.67□□□□□ -0.38
CLRN1-203ENST00000328863 TPD52L2O43399 206 aaKnown RBP12.67□□□□□ -0.38
CLRN1-203ENST00000328863 MITFO75030 526 aaPredicted RBP12.67□□□□□ -0.38
CLRN1-203ENST00000328863 ACSM4P0C7M7 580 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms