RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 FAM166AQ6J272 317 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 KCTD9Q7L273 389 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 GLRX5Q86SX6 157 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 OR52N4Q8NGI2 321 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 PTGES2Q9H7Z7 377 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 KIF25Q9UIL4 384 aa12.55□□□□□ -0.4
ATP2C1-201ENST00000328560 MEGF11A6BM72 1044 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 METTL21EPA6NDL7 271 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 TO15178 435 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 HEXBP07686 556 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 CD34P28906 385 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 DHODHQ02127 395 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 TUSC1Q2TAM9 212 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 ATPAF1Q5TC12 328 aaPredicted RBP12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 ZNF704Q6ZNC4 412 aaPredicted RBP12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 TRAPPC6BQ86SZ2 158 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 FJX1Q86VR8 437 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 ZNF101Q8IZC7 436 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 BOLLQ8N9W6 283 aaKnown RBP12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 SCARB1Q8WTV0 552 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 OIT3Q8WWZ8 545 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 C11orf40Q8WZ69 217 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 TMPRSS13Q9BYE2 586 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 RAB33BQ9H082 229 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 G6PC2Q9NQR9 355 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 LOC105371267A0A1B0GV96 52 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 DHPSP49366 369 aaPredicted RBP12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 PAPD4Q6PIY7 484 aaKnown RBP12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 RHOUQ7L0Q8 258 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 C17orf82Q86X59 251 aaPredicted RBP12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 ASB10Q8WXI3 467 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 TRBV11-1A0A0K0K1C0 115 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 A6NIZ1 184 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 PMS2P2O95744 297 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 RLN2P04090 185 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 ITGB2P05107 769 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 M6PRP20645 277 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 CDAP32320 146 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 CXCL12P48061 93 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 DAP3P51398 398 aaKnown RBP12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 RAP1BP61224 184 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 RAP1AP62834 184 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 FOXK1P85037 733 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 DHRS2Q13268 280 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 TMEM244Q5VVB8 128 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 RTN4RL2Q86UN3 420 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 D2HGDHQ8N465 521 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 TMEM229BQ8NBD8 167 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 MARVELD3Q96A59 401 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 SELENOIQ9C0D9 397 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 COMMD9Q9P000 198 aa12.54□□□□□ -0.4
ATP2C1-201ENST00000328560 VSTM2BA6NLU5 285 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 HMSDA8MTL9 139 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 FTCDNL1E5RQL4 147 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 SIGLEC5O15389 551 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 GIMD1P0DJR0 217 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 GNB3P16520 340 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 AKR1C4P17516 323 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 SIGLEC14Q08ET2 396 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 COX15Q7KZN9 410 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 SLC38A9Q8NBW4 561 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 ST7LQ8TDW4 575 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 SLAMF6Q96DU3 332 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 DMRTA2Q96SC8 542 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 CHRNA10Q9GZZ6 450 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 SLC17A5Q9NRA2 495 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 SLC22A11Q9NSA0 550 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 GDF2Q9UK05 429 aaPredicted RBP12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 SRPK3Q9UPE1 567 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 HRH3Q9Y5N1 445 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 A0A1W2PNR3 127 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 IGFBP3P17936 291 aaPredicted RBP12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 BCKDHBP21953 392 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 PRKACBP22694 351 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 BDKRB2P30411 391 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 C17orf67Q0P5P2 114 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 RGS7BPQ6MZT1 257 aaPredicted RBP12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 PDZD9Q8IXQ8 264 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 ZBTB8AQ96BR9 441 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 ADAT3Q96EY9 351 aaPredicted RBP12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 IFT46Q9NQC8 304 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 KCNMB2Q9Y691 235 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 DCNP07585 359 aaKnown RBP12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 SFTPDP35247 375 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 ZNF660Q6AZW8 331 aaPredicted RBP12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 SLC25A45Q8N413 288 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 SPEM1Q8N4L4 309 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 ZNF501Q96CX3 271 aaPredicted RBP12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 SLC25A21Q9BQT8 299 aaPredicted RBP12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 CHST11Q9NPF2 352 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 PPP4R1LQ9P1A2 415 aa12.53□□□□□ -0.4
ATP2C1-201ENST00000328560 OR5H14A6NHG9 310 aa12.52□□□□□ -0.4
ATP2C1-201ENST00000328560 TPPPO94811 219 aa12.52□□□□□ -0.4
ATP2C1-201ENST00000328560 PTCRAQ6ISU1 281 aaPredicted RBP12.52□□□□□ -0.4
ATP2C1-201ENST00000328560 RNF144BQ7Z419 303 aa12.52□□□□□ -0.4
ATP2C1-201ENST00000328560 OR51E1Q8TCB6 317 aa12.52□□□□□ -0.4
ATP2C1-201ENST00000328560 SDK2Q58EX2 2172 aa12.52□□□□□ -0.41
ATP2C1-201ENST00000328560 TRIOBPQ9H2D6 2365 aa12.52□□□□□ -0.41
ATP2C1-201ENST00000328560 DISC1C4P0D8 188 aa12.52□□□□□ -0.41
ATP2C1-201ENST00000328560 EEF1E1-BLOC1S5C9J1V9 151 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms