RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 NDUFA13Q9P0J0 144 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 FBXL3Q9UKT7 428 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 SLC5A6Q9Y289 635 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 R4GMQ9 66 aa8.95□□□□□ -0.98
VIPAS39-201ENST00000327028 CD1AP06126 327 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 CD79AP11912 226 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 HSD11B1P28845 292 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 PSMA6P60900 246 aaKnown RBP8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 UBE2NP61088 152 aaKnown RBP8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 PABPC1L2AQ5JQF8 200 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 DMKNQ6E0U4 476 aaPredicted RBP8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 OR1F12Q8NHA8 337 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 SMIM19Q96E16 107 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 FUNDC2Q9BWH2 189 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 ELOVL5Q9NYP7 299 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 A0A1B0GUH1 482 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 B8ZZF3 427 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 PLPP2O43688 288 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 CD53P19397 219 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 CELP19835 753 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 PSMB1P20618 241 aaKnown RBP8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 CRYGSP22914 178 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 HOXC12P31275 282 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 OTX1P32242 354 aaPredicted RBP8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 NANOS3P60323 173 aaKnown RBP8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 TUBA1BP68363 451 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 MFGE8Q08431 387 aaPredicted RBP8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 ALKBH1Q13686 389 aaKnown RBP8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 KRTAP27-1Q3LI81 207 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 GPR107Q5VW38 600 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 ZNF544Q6NX49 715 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 ARL9Q6T311 187 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 STAC2Q6ZMT1 411 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 TUBA1AQ71U36 451 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 P2RY8Q86VZ1 359 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 CLVS1Q8IUQ0 354 aaPredicted RBP8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 OR2G2Q8NGZ5 317 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 AKR7LQ8NHP1 331 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 HSD17B8Q92506 261 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 C4orf45Q96LM5 186 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 KCNJ15Q99712 375 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 MOB1AQ9H8S9 216 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 OBP2BQ9NPH6 170 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 CEPT1Q9Y6K0 416 aa8.94□□□□□ -0.98
VIPAS39-201ENST00000327028 PNMA8CA0A1B0GUJ8 204 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 COX5BP10606 129 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 GNLYP22749 145 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 IL32P24001 234 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 CHRNB4P30926 498 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 GABRA5P31644 462 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 HTR5AP47898 357 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 GDI2P50395 445 aaKnown RBP8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 MMP16P51512 607 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 CCR9P51686 369 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 RAB1AP62820 205 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 ADORA2A-AS1P86434 159 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 TSC22D1Q15714 1073 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 GSG1Q2KHT4 349 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 SLC25A35Q3KQZ1 300 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 MTFR2Q6P444 385 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 FJX1Q86VR8 437 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 CATSPERDQ86XM0 798 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 ALDH16A1Q8IZ83 802 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 SPTSSAQ969W0 71 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 PGLYRP3Q96LB9 341 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 HDHD5Q9BXW7 423 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 FAM192AQ9GZU8 254 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 FAM206AQ9NX38 181 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 ENPP5Q9UJA9 477 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 AMDHD2Q9Y303 409 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 OR5H1A6NKK0 313 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 LOC110117498-PIK3R3F6TDL0 507 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 H3BSA7 217 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 PNPP00491 289 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 APOC1P02654 83 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 KIR3DL2P43630 455 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 UQCRFS1P47985 274 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 CX3CR1P49238 355 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 RPS25P62851 125 aaKnown RBP8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 IGFBP7Q16270 282 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 C4orf17Q53FE4 359 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 WDR38Q5JTN6 314 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 C1QTNF12Q5T7M4 302 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 SLC16A12Q6ZSM3 486 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 MDP1Q86V88 176 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 ANKRD13BQ86YJ7 626 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 PRSS35Q8N3Z0 413 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 ZNF843Q8N446 348 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 WDR31Q8NA23 367 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 IL17RDQ8NFM7 739 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 ZNF420Q8TAQ5 688 aaPredicted RBP8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 ASB5Q8WWX0 329 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 CCDC120Q96HB5 630 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 DOK1Q99704 481 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 FRRS1LQ9P0K9 344 aa8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 SF3B6Q9Y3B4 125 aaKnown RBP8.93□□□□□ -0.98
VIPAS39-201ENST00000327028 ESPL1Q14674 2120 aa8.92□□□□□ -0.98
VIPAS39-201ENST00000327028 TRBV2A0A0J9YWF9 115 aa8.92□□□□□ -0.98
VIPAS39-201ENST00000327028 TMEM269A0A1B0GVZ9 245 aa8.92□□□□□ -0.98
VIPAS39-201ENST00000327028 TMEM212A6NML5 194 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms