RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 GPX5O75715 221 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 GIPP09681 153 aaPredicted RBP7.24□□□□□ -1.25
CIITA-201ENST00000324288 CDC34P49427 236 aaPredicted RBP7.24□□□□□ -1.25
CIITA-201ENST00000324288 RNF212Q495C1 297 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 RANBP10Q6VN20 620 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 ACOT7LQ6ZUV0 252 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 ASB17Q8WXJ9 295 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 VAMP8Q9BV40 100 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 PADI1Q9ULC6 663 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 ZNF835Q9Y2P0 537 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 AQP6Q13520 282 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 DCAF12Q5T6F0 453 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 H2BFWTQ7Z2G1 175 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 LSMEM2Q8N112 164 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 OR56B1Q8NGI3 324 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 LKAAEAR1Q8TD35 194 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 PLA2G12AQ9BZM1 189 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 OR2J2O76002 312 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 CD1CP29017 333 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 FGF8P55075 233 aaPredicted RBP7.24□□□□□ -1.25
CIITA-201ENST00000324288 KCTD12Q96CX2 325 aaKnown RBP7.24□□□□□ -1.25
CIITA-201ENST00000324288 SMIM7Q9BQ49 75 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 UBQLN4Q9NRR5 601 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 ZNF732B4DXR9 585 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 JUNBP17275 347 aaPredicted RBP7.24□□□□□ -1.25
CIITA-201ENST00000324288 AOAHP28039 575 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 CXCL12P48061 93 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 RAC1P63000 192 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 MFSD12Q6NUT3 480 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 MFSD9Q8NBP5 474 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 PIGQQ9BRB3 760 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 NEURL4Q96JN8 1562 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 RNF224P0DH78 156 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 DRD1P21728 446 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 RAB38P57729 211 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 OR1D5P58170 312 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 TSPAN31Q12999 210 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 FAM78AQ5JUQ0 283 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 MARCH3Q86UD3 253 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 ANGPTL5Q86XS5 388 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 OR4C16Q8NGL9 310 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 TMEM106AQ96A25 262 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 INSM2Q96T92 566 aaPredicted RBP7.24□□□□□ -1.25
CIITA-201ENST00000324288 SLC25A32Q9H2D1 315 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 CXorf36Q9H7Y0 433 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 PTPN13Q12923 2485 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 DCTDP32321 178 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 OPRM1P35372 400 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 SMUG1Q53HV7 270 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 LGI3Q8N145 548 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 ARRDC2Q8TBH0 407 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 ZNF2Q9BSG1 426 aaPredicted RBP7.24□□□□□ -1.25
CIITA-201ENST00000324288 SPNS1Q9H2V7 528 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 UBQLN3Q9H347 655 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 ISYNA1Q9NPH2 558 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 ZNF487B1APH4 448 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 ACSM4P0C7M7 580 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 DUSP1P28562 367 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 RPL29P47914 159 aaKnown RBP7.24□□□□□ -1.25
CIITA-201ENST00000324288 SNTB1Q13884 538 aaKnown RBP7.24□□□□□ -1.25
CIITA-201ENST00000324288 BTNL8Q6UX41 500 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 FA2HQ7L5A8 372 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 TMEM18Q96B42 140 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 LIN7CQ9NUP9 197 aaKnown RBP7.24□□□□□ -1.25
CIITA-201ENST00000324288 WIF1Q9Y5W5 379 aa7.24□□□□□ -1.25
CIITA-201ENST00000324288 AKR7A3O95154 331 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 C1SP09871 688 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 OR5G3P0C626 314 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 RAB5AP20339 215 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 MTNR1BP49286 362 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 FABP5Q01469 135 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 BAMBIQ13145 260 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 SRPK3Q9UPE1 567 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 GPR55Q9Y2T6 319 aaPredicted RBP7.23□□□□□ -1.25
CIITA-201ENST00000324288 A0A096LPE4 126 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 A0A1W2PPZ6 126 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 PRAMEF25A6NGN4 478 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 CALCRP30988 508 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 SRPXP78539 464 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 PRAMEF5Q5TYX0 476 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 PRAMEF6Q5VXH4 476 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 ASTLQ6HA08 431 aaPredicted RBP7.23□□□□□ -1.25
CIITA-201ENST00000324288 ELOVL1Q9BW60 279 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 TMED7-TICAM2A0A0A6YYA0 188 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 GALR3O60755 368 aaPredicted RBP7.23□□□□□ -1.25
CIITA-201ENST00000324288 TPOP07202 933 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 PSMB6P28072 239 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 CD38P28907 300 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 PRR27Q6MZM9 219 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 WDR74Q6RFH5 385 aaPredicted RBP7.23□□□□□ -1.25
CIITA-201ENST00000324288 RNF24Q9Y225 148 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 TMED7Q9Y3B3 224 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 CTSAP10619 480 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 SLC35A1P78382 337 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 MED25Q71SY5 747 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 BLNKQ8WV28 456 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 SLC25A46Q96AG3 418 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 SLC22A13Q9Y226 551 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 RGPD1P0DJD0 1748 aa7.23□□□□□ -1.25
CIITA-201ENST00000324288 TMEM200CA6NKL6 621 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms