RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 ZNF285Q96NJ3 590 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 FAM60AQ9NP50 221 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 FBXO4Q9UKT5 387 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 LRP12Q9Y561 859 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 BCL2L11O43521 198 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 AVPI1Q5T686 147 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 LRRC18Q8N456 261 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 MARCH1Q8TCQ1 289 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 HSD17B8Q92506 261 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 VSTM2LQ96N03 204 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 FRRS1LQ9P0K9 344 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 ICAM5Q9UMF0 924 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 SLC5A6Q9Y289 635 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 PATJQ8NI35 1801 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 SHISA3A0PJX4 238 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 H3BUI4 141 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 TNFSF14O43557 240 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 GPANK1O95872 356 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 OR1D5P58170 312 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 MALLQ13021 153 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.31□□□□□ -0.28
TCOF1-201ENST00000323668 ALKBH2Q6NS38 261 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 SARGQ9BW04 601 aa13.31□□□□□ -0.28
TCOF1-201ENST00000323668 IFNA17P01571 189 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 MSX1P28360 303 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 GPR85P60893 370 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 PBX4Q9BYU1 374 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 CNTNAP3Q9BZ76 1288 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 ZCCHC4Q9H5U6 513 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 EXOSC3Q9NQT5 275 aaKnown RBP13.3□□□□□ -0.28
TCOF1-201ENST00000323668 ASH2LQ9UBL3 628 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 B3GALT5Q9Y2C3 310 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 SPINT1O43278 529 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 GNB3P16520 340 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 CD27P26842 260 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 SLC35A1P78382 337 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 PLGLB1Q02325 96 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 DHRS2Q13268 280 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 PRAMEF20Q5VT98 475 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 CMTM1Q8IZ96 169 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 KCNRGQ8N5I3 272 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 ST8SIA1Q92185 356 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 ZNF649Q9BS31 505 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 OPN4Q9UHM6 478 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 DDAH2O95865 285 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 WNT11O96014 354 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 GABRA1P14867 456 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 CNR1P21554 472 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 AVPR2P30518 371 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 BAMBIQ13145 260 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 OPN5Q6U736 354 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 NPSR1Q6W5P4 371 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 FBXW12Q6X9E4 464 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 TCEAL3Q969E4 200 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 TSPAN32Q96QS1 320 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 NUDT19A8MXV4 375 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 TPPPO94811 219 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 ADRA2AP08913 450 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 DOK3Q7L591 496 aa13.3□□□□□ -0.28
TCOF1-201ENST00000323668 ARPC4-TTLL3A0A0A6YYG9 625 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 OR4C45A6NMZ5 311 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 SCRG1O75711 98 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 IFNA2P01563 188 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 ANKRD34CP0C6C1 535 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 EN2P19622 333 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-201ENST00000323668 ACAA2P42765 397 aaKnown RBP13.29□□□□□ -0.28
TCOF1-201ENST00000323668 AGFG1P52594 562 aaKnown RBP13.29□□□□□ -0.28
TCOF1-201ENST00000323668 EFNA3P52797 238 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 CCDC54Q8NEL0 328 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 PGLYRP3Q96LB9 341 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.29□□□□□ -0.28
TCOF1-201ENST00000323668 NTMQ9P121 344 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 TMEM272A0A1B0GTI8 110 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 SYNGR4O95473 234 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 PI3P19957 117 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 HOXC12P31275 282 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 LBX1P52954 281 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 ATP1B3P54709 279 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 PPP1CAP62136 330 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 TMEM52Q8NDY8 209 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 EDAQ92838 391 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 NUDT9Q9BW91 350 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 MOB1AQ9H8S9 216 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 ZNF275Q9NSD4 429 aaPredicted RBP13.29□□□□□ -0.28
TCOF1-201ENST00000323668 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 C4orf51C9J302 202 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 LAP3P28838 519 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 GRB2P62993 217 aaKnown RBP13.29□□□□□ -0.28
TCOF1-201ENST00000323668 PPP1R3BQ86XI6 285 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 GJC3Q8NFK1 279 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 S100PBPQ96BU1 408 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 PBOV1Q9GZY1 135 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 TAF9BQ9HBM6 251 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 ZNF286AQ9HBT8 521 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 A0A1W2PPC4 97 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 EIF1P41567 113 aaKnown RBP13.29□□□□□ -0.28
TCOF1-201ENST00000323668 ZNF117Q03924 483 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 PDZK1IP1Q13113 114 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 HMGN3Q15651 99 aa13.29□□□□□ -0.28
TCOF1-201ENST00000323668 GPBAR1Q8TDU6 330 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms