RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 BOLA1Q9Y3E2 137 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 PCDHGA5Q9Y5G8 931 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 NUBP2Q9Y5Y2 271 aa6.72□□□□□ -1.33
IFT88-201ENST00000319980 MRPS18BQ9Y676 258 aaKnown RBP6.72□□□□□ -1.33
IFT88-201ENST00000319980 LOC102725191A0A1B0GVB3 256 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 A0A1W2PNU3 283 aaPredicted RBP6.71□□□□□ -1.33
IFT88-201ENST00000319980 NPIPA2E9PIF3 369 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 NPIPA3F8WFD2 350 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 ACOT7O00154 380 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 EIF1BO60739 113 aaKnown RBP6.71□□□□□ -1.33
IFT88-201ENST00000319980 CTAG2O75638 210 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 WDPCPO95876 746 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 TTRP02766 147 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 ACSM4P0C7M7 580 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 UBCP0CG48 685 aaKnown RBP6.71□□□□□ -1.33
IFT88-201ENST00000319980 SLC2A1P11166 492 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 ACHEP22303 614 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 HTR2CP28335 458 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 SCAND1P57086 179 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 RAC1P63000 192 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 SF3B4Q15427 424 aaKnown RBP eCLIP6.71□□□□□ -1.33
IFT88-201ENST00000319980 TAF13Q15543 124 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 HIST3H3Q16695 136 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 TMEM95Q3KNT9 176 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 FAAP20Q6NZ36 180 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 ANKRD16Q6P6B7 361 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 NCCRP1Q6ZVX7 275 aaPredicted RBP6.71□□□□□ -1.33
IFT88-201ENST00000319980 NAXDQ8IW45 347 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 BEST4Q8NFU0 473 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 OR14L1PQ8NHC6 308 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 AKAP1Q92667 903 aaKnown RBP eCLIP6.71□□□□□ -1.33
IFT88-201ENST00000319980 DACT3Q96B18 629 aaPredicted RBP6.71□□□□□ -1.33
IFT88-201ENST00000319980 FGGYQ96C11 551 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 C7orf50Q9BRJ6 194 aaKnown RBP6.71□□□□□ -1.33
IFT88-201ENST00000319980 PBOV1Q9GZY1 135 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 BEX1Q9HBH7 125 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 HRASLSQ9HDD0 168 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 ING3Q9NXR8 418 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 COPZ2Q9P299 210 aa6.71□□□□□ -1.33
IFT88-201ENST00000319980 A0A0J9YW62 118 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 LOC100289279A0A1B0GTE1 492 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 GGT3PA6NGU5 568 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 SYT7O43581 403 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 GLSO94925 669 aaPredicted RBP6.71□□□□□ -1.34
IFT88-201ENST00000319980 ECDO95905 644 aaPredicted RBP6.71□□□□□ -1.34
IFT88-201ENST00000319980 HPP00738 406 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 FCER2P06734 321 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 RFPL3SP0C7P2 107 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 IGFBP3P17936 291 aaPredicted RBP6.71□□□□□ -1.34
IFT88-201ENST00000319980 DCTDP32321 178 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 GUCA1AP43080 201 aaPredicted RBP6.71□□□□□ -1.34
IFT88-201ENST00000319980 AP3S2P59780 193 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 GALK2Q01415 458 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 SGCAQ16586 387 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 ZNF239Q16600 458 aaKnown RBP6.71□□□□□ -1.34
IFT88-201ENST00000319980 C21orf62-AS1Q17RA5 79 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 CREB3L2Q70SY1 520 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 BIVMQ86UB2 503 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 NOXA1Q86UR1 476 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 C15orf40Q8WUR7 153 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 TMEM41AQ96HV5 264 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 LOXL4Q96JB6 756 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 OR2B2Q9GZK3 357 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 ATG5Q9H1Y0 275 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 DIABLOQ9NR28 239 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 PAQR5Q9NXK6 330 aaPredicted RBP6.71□□□□□ -1.34
IFT88-201ENST00000319980 STMN3Q9NZ72 180 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 GLTPQ9NZD2 209 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 EML6Q6ZMW3 1958 aa6.71□□□□□ -1.34
IFT88-201ENST00000319980 TRAV18A0A075B6X5 111 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 ARPC4-TTLL3A0A0A6YYG9 625 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 ZNF878C9JN71 531 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 TRAPPC6AO75865 159 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 SERPINA7P05543 415 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 H2AFB2P0C5Z0 115 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 FSTP19883 344 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 CSNK1A1P48729 337 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 CYB561P49447 251 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 CSNK2A1P68400 391 aaPredicted RBP6.7□□□□□ -1.34
IFT88-201ENST00000319980 MRPS10P82664 201 aaKnown RBP6.7□□□□□ -1.34
IFT88-201ENST00000319980 IFITM2Q01629 132 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 OXLD1Q5BKU9 147 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 FAM166AQ6J272 317 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 DHRS13Q6UX07 377 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 COMMD2Q86X83 199 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 ELMOD2Q8IZ81 293 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 BEST3Q8N1M1 668 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 NTNG2Q96CW9 530 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 SCMH1Q96GD3 660 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 DDA1Q9BW61 102 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 SPRY4Q9C004 299 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 MED28Q9H204 178 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 PLEKHA1Q9HB21 404 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 ZNF275Q9NSD4 429 aaPredicted RBP6.7□□□□□ -1.34
IFT88-201ENST00000319980 FLVCR2Q9UPI3 526 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 CACNA1HO95180 2353 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 TMEM272A0A1B0GTI8 110 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 MEGF11A6BM72 1044 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 SMLR1H3BR10 107 aa6.7□□□□□ -1.34
IFT88-201ENST00000319980 RBBP9O75884 186 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms