RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ZNF565Q8N9K5 539 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 ZSCAN4Q8NAM6 433 aaPredicted RBP4.3□□□□□ -1.72
PTPN13-201ENST00000316707 OR8G5Q8NG78 346 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 OR52N5Q8NH56 324 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 HHIPL1Q96JK4 782 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 VSTM2LQ96N03 204 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 CNTNAP3Q9BZ76 1288 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF230Q9UIE0 474 aaPredicted RBP4.3□□□□□ -1.72
PTPN13-201ENST00000316707 MRPS23Q9Y3D9 190 aaKnown RBP4.3□□□□□ -1.72
PTPN13-201ENST00000316707 TMED3Q9Y3Q3 217 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 PCYT1BQ9Y5K3 369 aaPredicted RBP4.3□□□□□ -1.72
PTPN13-201ENST00000316707 R4GMQ9 66 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 LOC107986453A0A1B0GWG9 222 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 FAM171A2A8MVW0 826 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 CSTBP04080 98 aaKnown RBP4.3□□□□□ -1.72
PTPN13-201ENST00000316707 ISG15P05161 165 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 POU2F2P09086 479 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 HKR1P10072 659 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 RPL12P30050 165 aaKnown RBP4.3□□□□□ -1.72
PTPN13-201ENST00000316707 RPL18Q07020 188 aaKnown RBP4.3□□□□□ -1.72
PTPN13-201ENST00000316707 RBM39Q14498 530 aaKnown RBP4.3□□□□□ -1.72
PTPN13-201ENST00000316707 OR7A5Q15622 319 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 AWAT1Q58HT5 328 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 KRBOX4Q5JUW0 171 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 KLHL24Q6TFL4 600 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 PRSS35Q8N3Z0 413 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 ZPLD1Q8TCW7 415 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 MAFIPQ8WZ33 124 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 ZDHHC4Q9NPG8 344 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 GDF2Q9UK05 429 aaPredicted RBP4.3□□□□□ -1.72
PTPN13-201ENST00000316707 KCNIP3Q9Y2W7 256 aa4.3□□□□□ -1.72
PTPN13-201ENST00000316707 PAPPA2Q9BXP8 1791 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 TRAV36DV7A0A075B6V5 113 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 GNRH1P01148 92 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 NGFRP08138 427 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 EMP2P54851 167 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 UCP2P55851 309 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 RPS21P63220 83 aaKnown RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 ID2Q02363 134 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 OR13D1Q8NGV5 346 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 LYPD6BQ8NI32 183 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 TOX2Q96NM4 488 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 BCL2L14Q9BZR8 327 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 SLC35B3Q9H1N7 401 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 C8orf33Q9H7E9 229 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 B3GALT5Q9Y2C3 310 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 A0A1B0GW64 132 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 GRXCR1A8MXD5 290 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 LRP3O75074 770 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 HSD17B7P56937 341 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 RPL27P61353 136 aaKnown RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 C14orf28Q4W4Y0 310 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 NLRC5Q86WI3 1866 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 ZFP82Q8N141 532 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 PAQR4Q8N4S7 273 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 CSNK1A1LQ8N752 337 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 NUBPLQ8TB37 319 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 CPNE2Q96FN4 548 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 C5orf34Q96MH7 638 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 TSSK2Q96PF2 358 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 ADAT1Q9BUB4 502 aaKnown RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 RNF126Q9BV68 326 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 C14orf166Q9Y224 244 aaKnown RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 H0YGG7 62 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF354AO60765 605 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 AHSA1O95433 338 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 LSSP48449 732 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 CAMLGP49069 296 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 EMDP50402 254 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 ARF3P61204 181 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 SP3Q02447 781 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 EIF3IQ13347 325 aaKnown RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 ELAVL1Q15717 326 aaKnown RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 GUK1Q16774 197 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 IAH1Q2TAA2 248 aaPredicted RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 OR52W1Q6IF63 320 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 ZAR1Q86SH2 424 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 CATSPERDQ86XM0 798 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 CACUL1Q86Y37 369 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 CA13Q8N1Q1 262 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 OR9A4Q8NGU2 314 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 OR5H2Q8NGV7 314 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF563Q8TA94 476 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 ZNRF4Q8WWF5 429 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 CLCC1Q96S66 551 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 SLC5A7Q9GZV3 580 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 S1PR5Q9H228 398 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 TXNIPQ9H3M7 391 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 TMEM231Q9H6L2 316 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 SIRT7Q9NRC8 400 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 C1orf123Q9NWV4 160 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 TCFL5Q9UL49 500 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 TNS1Q9HBL0 1735 aaKnown RBP4.29□□□□□ -1.72
PTPN13-201ENST00000316707 PTPRDP23468 1912 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 TMEM269A0A1B0GVZ9 245 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 PRSS37A4D1T9 235 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 TSTD3H0UI37 97 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 PSMD9O00233 223 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 ST8SIA5O15466 376 aa4.29□□□□□ -1.72
PTPN13-201ENST00000316707 ZNF264O43296 627 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms