RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 C10orf111Q8N326 155 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 ST7LQ8TDW4 575 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 TAF9BQ9HBM6 251 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 CTSFQ9UBX1 484 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 M0R135 149 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 IMPA2O14732 288 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 PLPP2O43688 288 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 LTC4SQ16873 150 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 LINC00303Q3SY05 128 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 ZNF628Q5EBL2 1059 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 YRDCQ86U90 279 aaKnown RBP12.48□□□□□ -0.41
SPAST-201ENST00000315285 KIAA1958Q8N8K9 716 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 OR4C3Q8NH37 302 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 PELI1Q96FA3 418 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 ZNF799Q96GE5 643 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 KIRREL1Q96J84 757 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 PBOV1Q9GZY1 135 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 BRWD1Q9NSI6 2320 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 LILRA5A6NI73 299 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 NXPH2O95156 264 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 GABRG2P18507 467 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 TAGLNQ01995 201 aaKnown RBP12.48□□□□□ -0.41
SPAST-201ENST00000315285 EIF4EBP2Q13542 120 aaPredicted RBP12.48□□□□□ -0.41
SPAST-201ENST00000315285 KCNRGQ8N5I3 272 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 YIPF5Q969M3 257 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 KTI12Q96EK9 354 aaPredicted RBP12.48□□□□□ -0.41
SPAST-201ENST00000315285 MRGPRX4Q96LA9 322 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 OR2A5Q96R48 311 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 GNG12Q9UBI6 72 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 PCYT1BQ9Y5K3 369 aaPredicted RBP12.48□□□□□ -0.41
SPAST-201ENST00000315285 PSMB6P28072 239 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 ATPAF1Q5TC12 328 aaPredicted RBP12.48□□□□□ -0.41
SPAST-201ENST00000315285 DPPA2Q7Z7J5 298 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 OR51A4Q8NGJ6 313 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 COX14Q96I36 57 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 LRRC61Q9BV99 259 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 SHANK3Q9BYB0 1731 aa12.48□□□□□ -0.41
SPAST-201ENST00000315285 OTOL1A6NHN0 477 aaPredicted RBP12.47□□□□□ -0.41
SPAST-201ENST00000315285 SDCBPO00560 298 aaPredicted RBP12.47□□□□□ -0.41
SPAST-201ENST00000315285 GNB3P16520 340 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 H3F3CQ6NXT2 135 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 LANCL3Q6ZV70 420 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 OR1J2Q8NGS2 313 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 MMP25Q9NPA2 562 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 EXOGQ9Y2C4 368 aaKnown RBP12.47□□□□□ -0.41
SPAST-201ENST00000315285 OR6C6A6NF89 314 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 SLC17A2O00624 439 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 ST8SIA3O43173 380 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 SCGB2A1O75556 95 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 GLB1P16278 677 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 C9orf50Q5SZB4 431 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 AVPI1Q5T686 147 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 DND1Q8IYX4 353 aaKnown RBP12.47□□□□□ -0.41
SPAST-201ENST00000315285 BHLHE23Q8NDY6 225 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 OXGR1Q96P68 337 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 ZNF2Q9BSG1 426 aaPredicted RBP12.47□□□□□ -0.41
SPAST-201ENST00000315285 PRMT8Q9NR22 394 aaPredicted RBP12.47□□□□□ -0.41
SPAST-201ENST00000315285 OR6C65A6NJZ3 312 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 TIMM8AO60220 97 aaPredicted RBP12.47□□□□□ -0.41
SPAST-201ENST00000315285 TUSC2O75896 110 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 CLDN1O95832 211 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 SRFP11831 508 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 HRH1P35367 487 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 DRD3P35462 400 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 SNRPNP63162 240 aaKnown RBP12.47□□□□□ -0.41
SPAST-201ENST00000315285 PRSS41Q7RTY9 318 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 VN1R4Q7Z5H5 301 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 MRPL41Q8IXM3 137 aaKnown RBP12.47□□□□□ -0.41
SPAST-201ENST00000315285 OR8D4Q8NGM9 314 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 OTOSQ8NHW6 89 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 OR8B4Q96RC9 309 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 EXO1Q9UQ84 846 aaKnown RBP12.47□□□□□ -0.41
SPAST-201ENST00000315285 SHOXO15266 292 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 OR2J2O76002 312 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 RGS11O94810 467 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 ZGLP1P0C6A0 271 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 TBPP20226 339 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 RNF4P78317 190 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 PLXDC2Q6UX71 529 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 SLC38A9Q8NBW4 561 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 TMED6Q8WW62 240 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 APH1AQ96BI3 265 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 C3orf49Q96BT1 292 aa12.47□□□□□ -0.41
SPAST-201ENST00000315285 CCDC71Q8IV32 467 aaPredicted RBP12.46□□□□□ -0.41
SPAST-201ENST00000315285 ZNF610Q8N9Z0 462 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 DMBX1Q8NFW5 382 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 OR52B4Q8NGK2 314 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 FER1L6-AS2Q96M78 137 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 DNAJB12Q9NXW2 375 aaKnown RBP12.46□□□□□ -0.41
SPAST-201ENST00000315285 COL4A5P29400 1685 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.46□□□□□ -0.41
SPAST-201ENST00000315285 KIR2DS1A0A191URI9 304 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 NPIPB8E9PQR5 432 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 LMO7DNF2Z398 122 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 ARPC3O15145 178 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 MPPED1O15442 326 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 SSX4O60224 188 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 GLI4P10075 376 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 GLULP15104 373 aa12.46□□□□□ -0.41
SPAST-201ENST00000315285 PI3P19957 117 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms