RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 PRSS42Q7Z5A4 293 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 OR4N4Q8N0Y3 316 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 HYAL4Q2M3T9 481 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 DRAM2Q6UX65 266 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 ZBTB34Q8NCN2 500 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 OR8G5Q8NG78 346 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 OR52R1Q8NGF1 315 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 OR13C2Q8NGS9 318 aa8.05□□□□□ -1.12
COL6A5-202ENST00000312481 SLC16A7O60669 478 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 SLC25A4P12235 298 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 G0S2P27469 103 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 SSR4P51571 173 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 AANATQ16613 207 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 AARDQ4LEZ3 155 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 C11orf87Q6NUJ2 197 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 UTS2O95399 124 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 BPIFB3P59826 476 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 RACK1P63244 317 aaKnown RBP8.04□□□□□ -1.12
COL6A5-202ENST00000312481 PRAMEF20Q5VT98 475 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 CATSPERDQ86XM0 798 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 TMEM25Q86YD3 366 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 OBSL1O75147 1896 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 PLSCR5A0PG75 271 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 PRSS37A4D1T9 235 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 RTCAO00442 366 aaKnown RBP8.04□□□□□ -1.12
COL6A5-202ENST00000312481 TBXA2RP21731 343 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 CD38P28907 300 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 GCH1P30793 250 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 HOXA1P49639 335 aaPredicted RBP8.04□□□□□ -1.12
COL6A5-202ENST00000312481 OC90Q02509 493 aaPredicted RBP8.04□□□□□ -1.12
COL6A5-202ENST00000312481 FAM209AQ5JX71 171 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 C2orf73Q8N5S3 287 aaPredicted RBP8.04□□□□□ -1.12
COL6A5-202ENST00000312481 OR4N2Q8NGD1 307 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 OR11L1Q8NGX0 322 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 BAHD1Q8TBE0 780 aaPredicted RBP8.04□□□□□ -1.12
COL6A5-202ENST00000312481 RTL8AQ9BWD3 113 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 BEX2Q9BXY8 128 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 ACTR3CQ9C0K3 210 aaPredicted RBP8.04□□□□□ -1.12
COL6A5-202ENST00000312481 A0A087WUJ7 227 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 NGFRP08138 427 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 GLB1P16278 677 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 IAH1Q2TAA2 248 aaPredicted RBP8.04□□□□□ -1.12
COL6A5-202ENST00000312481 ZNF626Q68DY1 528 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 VASNQ6EMK4 673 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 SDSLQ96GA7 329 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 ULBP2Q9BZM5 246 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 FEZF1A0PJY2 475 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 TMEM72A0PK05 275 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 SOCS7O14512 581 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 PCBP4P57723 403 aaKnown RBP8.04□□□□□ -1.12
COL6A5-202ENST00000312481 JAG1P78504 1218 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 FOXO1Q12778 655 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 TRA2AQ13595 282 aaKnown RBP eCLIP8.04□□□□□ -1.12
COL6A5-202ENST00000312481 TMEM207Q6UWW9 146 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 ADIPOR2Q86V24 386 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 MAML2Q8IZL2 1156 aaPredicted RBP8.04□□□□□ -1.12
COL6A5-202ENST00000312481 OR2AE1Q8NHA4 323 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 CRB3Q9BUF7 120 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 SHARPINQ9H0F6 387 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 FAM96BQ9Y3D0 163 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 TMED7-TICAM2A0A0A6YYA0 188 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 CT45A6P0DMU7 189 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 CT45A5P0DMU8 189 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 CT45A7P0DMV0 189 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 CT45A8P0DMV1 189 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 CT45A9P0DMV2 189 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 RBP2P50120 134 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 PMPCAQ10713 525 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 CCSMST1Q4G0I0 132 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 CT45A2Q5DJT8 189 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 CT45A1Q5HYN5 189 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 BTNL8Q6UX41 500 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 SLC16A12Q6ZSM3 486 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 FOXRED2Q8IWF2 684 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 OR2G2Q8NGZ5 317 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 CT45A3Q8NHU0 189 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 NIPSNAP1Q9BPW8 284 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 PRR14Q9BWN1 585 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 ZBP1Q9H171 429 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 FN3KRPQ9HA64 309 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 HRASLSQ9HDD0 168 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 LIM2P55344 173 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 SLC17A1Q14916 467 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 OVCH2Q7RTZ1 564 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 GABRG1Q8N1C3 465 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 AGBL5Q8NDL9 886 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 LMX1AQ8TE12 382 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 OR5M11Q96RB7 305 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 SPOCK3Q9BQ16 436 aa8.04□□□□□ -1.12
COL6A5-202ENST00000312481 A0A0B4J2E0 115 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 A0A1B0GX12 115 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 TRAPPC6AO75865 159 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 AQP7P3A6NL99 342 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 A8MV72 311 aaPredicted RBP8.03□□□□□ -1.12
COL6A5-202ENST00000312481 PSMD9O00233 223 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 WISP3O95389 354 aaPredicted RBP8.03□□□□□ -1.12
COL6A5-202ENST00000312481 KLF8O95600 359 aaPredicted RBP8.03□□□□□ -1.12
COL6A5-202ENST00000312481 OR4E1P0C645 316 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 BCL6P41182 706 aa8.03□□□□□ -1.12
COL6A5-202ENST00000312481 PDZK1IP1Q13113 114 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms