RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 LSM6P62312 80 aaKnown RBP15.8■□□□□ 0.12
HMGA1-201ENST00000311487 SPOCK1Q08629 439 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 KCNMB1Q16558 191 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 MEX3BQ6ZN04 569 aaKnown RBP15.8■□□□□ 0.12
HMGA1-201ENST00000311487 SLC35F2Q8IXU6 374 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 OR10S1Q8NGN2 331 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 TMEM80Q96HE8 168 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 OR5M11Q96RB7 305 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 OR51B6Q9H340 312 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 PLEK2Q9NYT0 353 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 TIMM10BQ9Y5J6 103 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 CENPEQ02224 2701 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 A0A1W2PQL4 384 aaPredicted RBP15.8■□□□□ 0.12
HMGA1-201ENST00000311487 RAB36O95755 333 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 HRGP04196 525 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 GALK2Q01415 458 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 DCTN2Q13561 401 aaKnown RBP15.8■□□□□ 0.12
HMGA1-201ENST00000311487 DOC2BQ14184 412 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 CCDC92Q53HC0 331 aaPredicted RBP15.8■□□□□ 0.12
HMGA1-201ENST00000311487 ARMCX4Q5H9R4 360 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 SEZ6L2Q6UXD5 910 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 PLEKHG7Q6ZR37 379 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 C17orf78Q8N4C9 275 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 LAMP5Q9UJQ1 280 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 N6AMT1Q9Y5N5 214 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 ROS1P08922 2347 aa15.8■□□□□ 0.12
HMGA1-201ENST00000311487 DOK2O60496 412 aa15.79■□□□□ 0.12
HMGA1-201ENST00000311487 CLPXO76031 633 aa15.79■□□□□ 0.12
HMGA1-201ENST00000311487 UBL3O95164 117 aa15.79■□□□□ 0.12
HMGA1-201ENST00000311487 INHBBP09529 407 aa15.79■□□□□ 0.12
HMGA1-201ENST00000311487 SLC16A9Q7RTY1 509 aa15.79■□□□□ 0.12
HMGA1-201ENST00000311487 LHFPL3Q86UP9 236 aa15.79■□□□□ 0.12
HMGA1-201ENST00000311487 CDC20BQ86Y33 519 aa15.79■□□□□ 0.12
HMGA1-201ENST00000311487 PAQR4Q8N4S7 273 aaPredicted RBP15.79■□□□□ 0.12
HMGA1-201ENST00000311487 ABHD6Q9BV23 337 aa15.79■□□□□ 0.12
HMGA1-201ENST00000311487 MARCH7Q9H992 704 aa15.79■□□□□ 0.12
HMGA1-201ENST00000311487 ARPC4-TTLL3A0A0A6YYG9 625 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 IGHV1-18A0A0C4DH31 117 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 SGCEO43556 437 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 GADD45AP24522 165 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 BLVRAP53004 296 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 GGTLC2Q14390 218 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 NRN1LQ496H8 165 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 SP5Q6BEB4 398 aaPredicted RBP15.78■□□□□ 0.12
HMGA1-201ENST00000311487 LRRN1Q6UXK5 716 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 VASH1Q7L8A9 365 aaPredicted RBP15.78■□□□□ 0.12
HMGA1-201ENST00000311487 OR52I1Q8NGK6 324 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 OTOSQ8NHW6 89 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 NANOS1Q8WY41 292 aaKnown RBP15.78■□□□□ 0.12
HMGA1-201ENST00000311487 ZNF75AQ96N20 296 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 AMDHD2Q9Y303 409 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 LSM2Q9Y333 95 aaKnown RBP15.78■□□□□ 0.12
HMGA1-201ENST00000311487 SNTNA6NMZ2 147 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 SIAH2O43255 324 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 CECR9P0C854 216 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 TGFBR1P36897 503 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 RGS6P49758 472 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 SORDQ00796 357 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 MED22Q15528 200 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 RNLSQ5VYX0 342 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 TMEM53Q6P2H8 277 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 NAA40Q86UY6 237 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 DMRTC2Q8IXT2 367 aaPredicted RBP15.78■□□□□ 0.12
HMGA1-201ENST00000311487 PIAS4Q8N2W9 510 aaPredicted RBP15.78■□□□□ 0.12
HMGA1-201ENST00000311487 GJC3Q8NFK1 279 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 DYNC2LI1Q8TCX1 351 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 ST7LQ8TDW4 575 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 SLAMF6Q96DU3 332 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 HEATR1Q9H583 2144 aaKnown RBP15.78■□□□□ 0.12
HMGA1-201ENST00000311487 PNRC2Q9NPJ4 139 aaKnown RBP15.78■□□□□ 0.12
HMGA1-201ENST00000311487 HAO2Q9NYQ3 351 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 CLEC2DQ9UHP7 191 aa15.78■□□□□ 0.12
HMGA1-201ENST00000311487 ABCA4P78363 2273 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 CELSR2Q9HCU4 2923 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 LOC100509620A0A075B734 347 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 C5orf49A4QMS7 147 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 F5H5K5 113 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 AIREO43918 545 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 TMCC2O75069 709 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 HSMCR30P0CW71 290 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 ZNF14P17017 642 aaPredicted RBP15.77■□□□□ 0.12
HMGA1-201ENST00000311487 ANOS1P23352 680 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 ARR3P36575 388 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 HTR5AP47898 357 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 PCBD1P61457 104 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 BSPH1Q075Z2 132 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 MOGQ16653 247 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 MGLLQ99685 303 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 C1orf198Q9H425 327 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 PLGRKTQ9HBL7 147 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 FBXL3Q9UKT7 428 aa15.77■□□□□ 0.12
HMGA1-201ENST00000311487 DIMT1Q9UNQ2 313 aaKnown RBP15.77■□□□□ 0.12
HMGA1-201ENST00000311487 HRNRQ86YZ3 2850 aaPredicted RBP15.77■□□□□ 0.11
HMGA1-201ENST00000311487 A0A1B0GVG6 124 aa15.76■□□□□ 0.11
HMGA1-201ENST00000311487 DPRXA6NFQ7 191 aa15.76■□□□□ 0.11
HMGA1-201ENST00000311487 CBR1P16152 277 aa15.76■□□□□ 0.11
HMGA1-201ENST00000311487 IGFBP2P18065 325 aa15.76■□□□□ 0.11
HMGA1-201ENST00000311487 ALOX5APP20292 161 aa15.76■□□□□ 0.11
HMGA1-201ENST00000311487 STOMP27105 288 aa15.76■□□□□ 0.11
HMGA1-201ENST00000311487 PCK2Q16822 640 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms