RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 SYPL1Q16563 259 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 SLC39A5Q6ZMH5 540 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 FBXO27Q8NI29 283 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 COX7A2P2O60397 106 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 SULT1C4O75897 302 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 CDKN3Q16667 212 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 C17orf107Q6ZR85 190 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 P2RY10O00398 339 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 ANKRD16Q6P6B7 361 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 OR13C5Q8NGS8 318 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 TIMM10BQ9Y5J6 103 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 NME2P1O60361 137 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 RPL27P61353 136 aaKnown RBP14.18□□□□□ -0.14
HCFC1-201ENST00000310441 EDDM3AQ14507 147 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 PLA1AQ53H76 456 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 OR51F2Q8NH61 342 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 LHX4Q969G2 390 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 SLC39A13Q96H72 371 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 C20orf24Q9BUV8 137 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 LIMS3P0CW19 117 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 LIMS4P0CW20 117 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 LOC102723971A0A1B0GUV8 181 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 PNLIPRP3Q17RR3 467 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 CLEC14AQ86T13 490 aa14.18□□□□□ -0.14
HCFC1-201ENST00000310441 KCNJ3P48549 501 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 HIST1H3AP68431 136 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 DUSP13Q9UII6 198 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 NRAPQ86VF7 1730 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 SIGLEC6O43699 453 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 ANKRD34CP0C6C1 535 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 PPP1CAP62136 330 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 GUK1Q16774 197 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 OR10G3Q8NGC4 313 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 ALX3O95076 343 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 IVDP26440 423 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 APEX1P27695 318 aaKnown RBP14.17□□□□□ -0.14
HCFC1-201ENST00000310441 AKR1C3P42330 323 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 ZNF468Q5VIY5 522 aaPredicted RBP14.17□□□□□ -0.14
HCFC1-201ENST00000310441 MEX3DQ86XN8 651 aaKnown RBP14.17□□□□□ -0.14
HCFC1-201ENST00000310441 OR2M3Q8NG83 312 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 SH3BGRL2Q9UJC5 107 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 TFAP2AP05549 437 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 NEIL1Q96FI4 390 aaPredicted RBP14.17□□□□□ -0.14
HCFC1-201ENST00000310441 SPOCK3Q9BQ16 436 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 SORBS1Q9BX66 1292 aaKnown RBP14.17□□□□□ -0.14
HCFC1-201ENST00000310441 HOXC5Q00444 222 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 FCN2Q15485 313 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 PLAC9Q5JTB6 97 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 POLEQ07864 2286 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 POM121L2Q96KW2 1035 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 FOXN4Q96NZ1 517 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 SLCO1B1Q9Y6L6 691 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 M0QYG6 137 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 CLDN12P56749 244 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 WDR73Q6P4I2 378 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 DHRS11Q6UWP2 260 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 UBQLN3Q9H347 655 aa14.17□□□□□ -0.14
HCFC1-201ENST00000310441 OR5G3P0C626 314 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 RPL12P30050 165 aaKnown RBP14.16□□□□□ -0.14
HCFC1-201ENST00000310441 KIAA1024LP59773 190 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 Q8IYB0 196 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 PIANPQ8IYJ0 282 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 C17orf78Q8N4C9 275 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 SMIM19Q96E16 107 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 IER2Q9BTL4 223 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 SPTA1P02549 2419 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 LGI1O95970 557 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 RGRP47804 291 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 LEXMQ3ZCV2 418 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 TMEM64Q6YI46 380 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 PARS2Q7L3T8 475 aaKnown RBP14.16□□□□□ -0.14
HCFC1-201ENST00000310441 ANKLE1Q8NAG6 615 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 GALMQ96C23 342 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 TPSD1Q9BZJ3 242 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 A0A1B0GWA3 101 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 TEAD1P28347 426 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 TNFRSF13CQ96RJ3 184 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 C1QTNF3Q9BXJ4 246 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 UBE2ZQ9H832 354 aaPredicted RBP14.16□□□□□ -0.14
HCFC1-201ENST00000310441 TBXA2RP21731 343 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 ARHGEF39Q8N4T4 335 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 A0A0B4J203 849 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 CTNSO60931 367 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 ALDOCP09972 364 aaKnown RBP14.16□□□□□ -0.14
HCFC1-201ENST00000310441 DRAM2Q6UX65 266 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 ATP5SQ99766 215 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 J3KTA2 159 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 SLCO2B1O94956 709 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 KIR2DS2P43631 304 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 MEOX1P50221 254 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 FABP9Q0Z7S8 132 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 B3GNTL1Q67FW5 361 aaPredicted RBP14.16□□□□□ -0.14
HCFC1-201ENST00000310441 TMPRSS11FQ6ZWK6 438 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 UBE3DQ7Z6J8 389 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 ADIPOR1Q96A54 375 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 CDCP1Q9H5V8 836 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 GRPP07492 148 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 SHC1P29353 583 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 CLDN2P57739 230 aa14.16□□□□□ -0.14
HCFC1-201ENST00000310441 ZNF687Q8N1G0 1237 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms