RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 SPTBN1Q01082 2364 aaKnown RBP7.3□□□□□ -1.24
CHD6-201ENST00000309279 LRRK2Q5S007 2527 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 ZC3H12DA2A288 527 aaKnown RBP7.29□□□□□ -1.24
CHD6-201ENST00000309279 CLEC18AA5D8T8 446 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 TRAPPC13A5PLN9 417 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 FABP12A6NFH5 140 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 FBLL1A6NHQ2 334 aaKnown RBP7.29□□□□□ -1.24
CHD6-201ENST00000309279 CPSF4LA6NMK7 179 aaKnown RBP7.29□□□□□ -1.24
CHD6-201ENST00000309279 A8MVM7 634 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 TEX46H3BTG2 121 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 TNFSF11O14788 317 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 FFAR1O14842 300 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 ARPC3O15145 178 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 CHP2O43745 196 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 MGRN1O60291 552 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 LYPD3O95274 346 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 IFNW1P05000 195 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 SERPINA5P05154 406 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 SFTPDP35247 375 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 TIMP3P35625 211 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 TGFBR2P37173 567 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 PTDSS1P48651 473 aaKnown RBP7.29□□□□□ -1.24
CHD6-201ENST00000309279 EGR4Q05215 589 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 SLC3A1Q07837 685 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 SNAPC1Q16533 368 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 PDSS1Q5T2R2 415 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 C1QL3Q5VWW1 255 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 HBMQ6B0K9 141 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 PODNL1Q6PEZ8 512 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 C5orf46Q6UWT4 87 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 CLEC18BQ6UXF7 455 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 CYP2R1Q6VVX0 501 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 C3P1Q6ZMU1 363 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 ZBTB49Q6ZSB9 765 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 TMPPEQ6ZT21 453 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 PGAP1Q75T13 922 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 SMIM15Q7Z3B0 74 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 AQP12AQ8IXF9 295 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 RPRMLQ8N4K4 120 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 MARVELD2Q8N4S9 558 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 CLEC18CQ8NCF0 446 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 ATP6V1C2Q8NEY4 427 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 OR2V1Q8NHB1 315 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 SMPDL3BQ92485 455 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 OSTF1Q92882 214 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 WNT2BQ93097 391 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 DDIT4LQ96D03 193 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 PRSS27Q9BQR3 290 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 OR11A1Q9GZK7 315 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 NUAK2Q9H093 628 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 HRH4Q9H3N8 390 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 IL1RAPQ9NPH3 570 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 BRD7Q9NPI1 651 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 TIGARQ9NQ88 270 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 MYEF2Q9P2K5 600 aaKnown RBP7.29□□□□□ -1.24
CHD6-201ENST00000309279 CLCF1Q9UBD9 225 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 RPS6KB2Q9UBS0 482 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 EXOGQ9Y2C4 368 aaKnown RBP7.29□□□□□ -1.24
CHD6-201ENST00000309279 GRIP1Q9Y3R0 1128 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 ADGRG4Q8IZF6 3080 aa7.29□□□□□ -1.24
CHD6-201ENST00000309279 DOPEY1Q5JWR5 2465 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 IGKV1D-42A0A075B6H8 117 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 MBD3L4A6NDZ8 208 aaPredicted RBP7.28□□□□□ -1.24
CHD6-201ENST00000309279 MBD3L3A6NE82 208 aaPredicted RBP7.28□□□□□ -1.24
CHD6-201ENST00000309279 MBD3L5A6NJ08 208 aaPredicted RBP7.28□□□□□ -1.24
CHD6-201ENST00000309279 ELOA3DA6NLF2 546 aaPredicted RBP7.28□□□□□ -1.24
CHD6-201ENST00000309279 CCL21O00585 134 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 FZD7O75084 574 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 CCNKO75909 580 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 PMS2P2O95744 297 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 GLI4P10075 376 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 ZNF26P17031 533 aaPredicted RBP7.28□□□□□ -1.24
CHD6-201ENST00000309279 DTYMKP23919 212 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 CEACAM8P31997 349 aaPredicted RBP7.28□□□□□ -1.24
CHD6-201ENST00000309279 MAGEA2P43356 314 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 ARF6P62330 175 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 H3F3AP84243 136 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 VLDLRP98155 873 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 MYBPHQ13203 477 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 SMCO1Q147U7 214 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 ELOA3BQ3SY89 546 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 CHRFAM7AQ494W8 412 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 TMEM211Q6ICI0 200 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 RPTNQ6XPR3 784 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 DEF8Q6ZN54 512 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 CHMP1BQ7LBR1 199 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 KLBQ86Z14 1044 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 LNX2Q8N448 690 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 BEND2Q8NDZ0 799 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 ELOA3Q8NG57 546 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 OR4D6Q8NGJ1 314 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 MBD3L2Q8NHZ7 208 aaPredicted RBP7.28□□□□□ -1.24
CHD6-201ENST00000309279 UTP4Q969X6 686 aaKnown RBP7.28□□□□□ -1.24
CHD6-201ENST00000309279 CPNE4Q96A23 557 aaPredicted RBP7.28□□□□□ -1.24
CHD6-201ENST00000309279 OR5B2Q96R09 309 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 ZNF300Q96RE9 604 aaPredicted RBP7.28□□□□□ -1.24
CHD6-201ENST00000309279 TMEM43Q9BTV4 400 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 MAGIXQ9H6Y5 334 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 ABCB10Q9NRK6 738 aa7.28□□□□□ -1.24
CHD6-201ENST00000309279 RIMS3Q9UJD0 308 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms