RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 ALKBH1Q13686 389 aaKnown RBP9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 PCGF3Q3KNV8 242 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 FAM74A1Q5RGS3 127 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 PEAR1Q5VY43 1037 aaPredicted RBP9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 ULK3Q6PHR2 472 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 PRR22Q8IZ63 422 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 MUC20Q8N307 709 aaPredicted RBP9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 ZNF561Q8N587 486 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 PHOSPHO1Q8TCT1 267 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 GAL3ST4Q96RP7 486 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 VN1R1Q9GZP7 353 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 MFFQ9GZY8 342 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 C1orf198Q9H425 327 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 MKKSQ9NPJ1 570 aaPredicted RBP9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 RXFP3Q9NSD7 469 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 DNAJB12Q9NXW2 375 aaKnown RBP9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 MEX3AA1L020 520 aaKnown RBP9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 OR6C68A6NDL8 312 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 IDSB3KWA1 339 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 SCRG1O75711 98 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 CLPSP04118 112 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 PNLIPP16233 465 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 CXADRP78310 365 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 HABP2Q14520 560 aaPredicted RBP9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 ZNHIT3Q15649 155 aaPredicted RBP9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 LINC01590Q5TEZ4 76 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 LCN10Q6JVE6 187 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 ZNF550Q7Z398 422 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 ZNF227Q86WZ6 799 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 MISPQ8IVT2 679 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 C15orf54Q8N8G6 183 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 ZNF615Q8N8J6 731 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 GATSQ8NAP1 163 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 RXFP4Q8TDU9 374 aa9.28□□□□□ -0.92
APOBEC3F-201ENST00000308521 HEATR5AQ86XA9 2040 aa9.27□□□□□ -0.92
APOBEC3F-201ENST00000308521 CNTRLQ7Z7A1 2325 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 TRBV5-7A0A0A0MS05 114 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 A0A0D9SG52 128 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 GMFGO60234 142 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 UPK3AO75631 287 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 KLK3P07288 261 aaPredicted RBP9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 AKAIN1P0CW23 69 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 RNF224P0DH78 156 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 CCL4P13236 92 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 AGTR1P30556 359 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 MAGEB1P43366 347 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 SLC25A1P53007 311 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 DCAF12L2Q5VW00 463 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 ANKRD16Q6P6B7 361 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 SLC16A9Q7RTY1 509 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 FAM220AQ7Z4H9 259 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 OR4C3Q8NH37 302 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 OR5AK2Q8NH90 309 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 GPX7Q96SL4 187 aaPredicted RBP9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 NMNAT3Q96T66 252 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 GHRLQ9UBU3 117 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 STEAP1Q9UHE8 339 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 RALGAPA1Q6GYQ0 2036 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 RIF1Q5UIP0 2472 aaKnown RBP9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 TRBV23-1A0A0A0MS06 115 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 LNP1A1A4G5 178 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 PRR32B1ATL7 298 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 EIF4E2O60573 245 aaKnown RBP9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 RLN1P04808 185 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 TMIGD3P0DMS9 266 aaPredicted RBP9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 SLC2A1P11166 492 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 MST1P26927 711 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 RPL4P36578 427 aaKnown RBP9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 FUT7Q11130 342 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 RBMS3Q6XE24 437 aaKnown RBP9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 C16orf47Q6ZP98 133 aaPredicted RBP9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 COX15Q7KZN9 410 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 KMT5CQ86Y97 462 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 OR6K6Q8NGW6 343 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 ZNF417Q8TAU3 575 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 STT3BQ8TCJ2 826 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 RHBDD1Q8TEB9 315 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 TNFAIP8L1Q8WVP5 186 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 NAT6Q93015 286 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 LURAP1Q96LR2 239 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 NEU1Q99519 415 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 FAM117AQ9C073 453 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 TSPAN10Q9H1Z9 355 aaPredicted RBP9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 MYOZ1Q9NP98 299 aaPredicted RBP9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 RARRES3Q9UL19 164 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 MOKQ9UQ07 419 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 ZNF337Q9Y3M9 751 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 ADAM18Q9Y3Q7 739 aa9.27□□□□□ -0.93
APOBEC3F-201ENST00000308521 TMEM272A0A1B0GTI8 110 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 GGT3PA6NGU5 568 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 C17orf51A8MQB3 221 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 PMS2P2O95744 297 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 IGF2P01344 180 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 SLC37A1P57057 533 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 RAB2AP61019 212 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 SRSF4Q08170 494 aaKnown RBP9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 PDZK1IP1Q13113 114 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 TMPRSS12Q86WS5 348 aa9.26□□□□□ -0.93
APOBEC3F-201ENST00000308521 CARFQ8N187 725 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms