RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 GCNT6Q5T4J0 391 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 SFRP4Q6FHJ7 346 aaPredicted RBP9.7□□□□□ -0.86
SMIM4-201ENST00000307106 PGBD2Q6P3X8 592 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 MSANTD1Q6ZTZ1 278 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 BTN2A1Q7KYR7 527 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 IGFN1Q86VF2 1251 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 CALHM3Q86XJ0 350 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 NDUFA11Q86Y39 141 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 SLC30A8Q8IWU4 369 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 CLDN22Q8N7P3 220 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 BHLHE23Q8NDY6 225 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 Q8TCH9 128 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 ADAMTS16Q8TE57 1224 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 CLPTM1LQ96KA5 538 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 ZNF582Q96NG8 517 aaPredicted RBP9.7□□□□□ -0.86
SMIM4-201ENST00000307106 SORT1Q99523 831 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 KRTAP17-1Q9BYP8 105 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 PCDHAC1Q9H158 963 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 CENPHQ9H3R5 247 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 PTTG3PQ9NZH4 202 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 KPTNQ9Y664 436 aa9.7□□□□□ -0.86
SMIM4-201ENST00000307106 SDHDO14521 159 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 NPFFO15130 113 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 SERPINB7O75635 380 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 LYPD3O95274 346 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 HLA-DPB1P04440 258 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 MSR1P21757 451 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 EEF1B2P24534 225 aaKnown RBP9.69□□□□□ -0.86
SMIM4-201ENST00000307106 AQP1P29972 269 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 GATA4P43694 442 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 SLC1A6P48664 564 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 GUCA2AQ02747 115 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 SCRN3Q0VDG4 424 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 CLEC12AQ5QGZ9 265 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 NXNQ6DKJ4 435 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 METAP1DQ6UB28 335 aaPredicted RBP9.69□□□□□ -0.86
SMIM4-201ENST00000307106 FBXW12Q6X9E4 464 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 FOXL2NBQ6ZUU3 175 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 ARMC8Q8IUR7 673 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 KIRREL3Q8IZU9 778 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 C10orf111Q8N326 155 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 OR6T1Q8NGN1 323 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 SLC7A6Q92536 515 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 ERGIC1Q969X5 290 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 RBP7Q96R05 134 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 ZNF426Q9BUY5 554 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 PAIP1Q9H074 479 aaKnown RBP9.69□□□□□ -0.86
SMIM4-201ENST00000307106 RANBP3Q9H6Z4 567 aaPredicted RBP9.69□□□□□ -0.86
SMIM4-201ENST00000307106 CNTD2Q9H8S5 307 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 GRPEL1Q9HAV7 217 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 MEPEQ9NQ76 525 aaPredicted RBP9.69□□□□□ -0.86
SMIM4-201ENST00000307106 SIRT7Q9NRC8 400 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 UFSP2Q9NUQ7 469 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 PNPOQ9NVS9 261 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 SLC7A7Q9UM01 511 aa9.69□□□□□ -0.86
SMIM4-201ENST00000307106 SACSQ9NZJ4 4579 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 A0A1W2PRD5 423 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 A0A1W2PRF3 423 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 A0A1W2PRM7 423 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 ADARB2-AS1A8MUL3 147 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 IQCF6A8MYZ5 107 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 C3orf84H3BNL1 204 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 H3BUX3 64 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 SGCEO43556 437 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 FCN3O75636 299 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 ECDO95905 644 aaPredicted RBP9.68□□□□□ -0.86
SMIM4-201ENST00000307106 CD28P10747 220 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 FUT1P19526 365 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 FPR3P25089 353 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 MSX2P35548 267 aaPredicted RBP9.68□□□□□ -0.86
SMIM4-201ENST00000307106 PRB3Q04118 309 aaPredicted RBP9.68□□□□□ -0.86
SMIM4-201ENST00000307106 MAB21L1Q13394 359 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 TOP3AQ13472 1001 aaPredicted RBP9.68□□□□□ -0.86
SMIM4-201ENST00000307106 SCARB2Q14108 478 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 NPTX1Q15818 432 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 PRAMEF6Q5VXH4 476 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 CELF2-AS1Q8N7Q2 184 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 BOLLQ8N9W6 283 aaKnown RBP9.68□□□□□ -0.86
SMIM4-201ENST00000307106 SMYD1Q8NB12 490 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 PCYOX1LQ8NBM8 494 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 WFDC9Q8NEX5 89 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 MOSPD2Q8NHP6 518 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 FNDC8Q8TC99 324 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 RASD2Q96D21 266 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 MPP4Q96JB8 637 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 WACQ9BTA9 647 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 ALG12Q9BV10 488 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 WDR55Q9H6Y2 383 aaPredicted RBP9.68□□□□□ -0.86
SMIM4-201ENST00000307106 EMC7Q9NPA0 242 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 TMEM100Q9NV29 134 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 ONECUT1Q9UBC0 465 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 RPUSD1Q9UJJ7 312 aaKnown RBP9.68□□□□□ -0.86
SMIM4-201ENST00000307106 HAO1Q9UJM8 370 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 MAB21L2Q9Y586 359 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 TENM2Q9NT68 2774 aa9.68□□□□□ -0.86
SMIM4-201ENST00000307106 MEIOCA2RUB1 952 aa9.67□□□□□ -0.86
SMIM4-201ENST00000307106 TRAPPC13A5PLN9 417 aa9.67□□□□□ -0.86
SMIM4-201ENST00000307106 NPIPB13A6NJU9 1138 aa9.67□□□□□ -0.86
SMIM4-201ENST00000307106 NPIPB4C9JG80 1138 aa9.67□□□□□ -0.86
SMIM4-201ENST00000307106 J3QW42 95 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms