RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 MRM2Q9UI43 246 aaKnown RBP23.54■■□□□ 1.36
HDAC3-201ENST00000305264 FBXL3Q9UKT7 428 aa23.54■■□□□ 1.36
HDAC3-201ENST00000305264 EXOSC1Q9Y3B2 195 aaKnown RBP23.54■■□□□ 1.36
HDAC3-201ENST00000305264 LRP12Q9Y561 859 aa23.54■■□□□ 1.36
HDAC3-201ENST00000305264 DOPEY2Q9Y3R5 2298 aa23.54■■□□□ 1.36
HDAC3-201ENST00000305264 RGS10O43665 173 aa23.54■■□□□ 1.36
HDAC3-201ENST00000305264 MT-ND2P03891 347 aa23.54■■□□□ 1.36
HDAC3-201ENST00000305264 MYL12AP19105 171 aa23.54■■□□□ 1.36
HDAC3-201ENST00000305264 CRYGSP22914 178 aa23.54■■□□□ 1.36
HDAC3-201ENST00000305264 EGR3Q06889 387 aa23.54■■□□□ 1.36
HDAC3-201ENST00000305264 PAQR4Q8N4S7 273 aaPredicted RBP23.54■■□□□ 1.36
HDAC3-201ENST00000305264 SNX33Q8WV41 574 aa23.54■■□□□ 1.36
HDAC3-201ENST00000305264 POM121L2Q96KW2 1035 aa23.54■■□□□ 1.36
HDAC3-201ENST00000305264 ATPIF1Q9UII2 106 aa23.54■■□□□ 1.36
HDAC3-201ENST00000305264 HEATR1Q9H583 2144 aaKnown RBP23.53■■□□□ 1.36
HDAC3-201ENST00000305264 H2BFMP0C1H6 154 aa23.53■■□□□ 1.36
HDAC3-201ENST00000305264 COX5BP10606 129 aa23.53■■□□□ 1.36
HDAC3-201ENST00000305264 PAX7P23759 505 aa23.53■■□□□ 1.36
HDAC3-201ENST00000305264 CDH15P55291 814 aa23.53■■□□□ 1.36
HDAC3-201ENST00000305264 GALK2Q01415 458 aa23.53■■□□□ 1.36
HDAC3-201ENST00000305264 TP53I3Q53FA7 332 aa23.53■■□□□ 1.36
HDAC3-201ENST00000305264 MEX3BQ6ZN04 569 aaKnown RBP23.53■■□□□ 1.36
HDAC3-201ENST00000305264 PLEKHG7Q6ZR37 379 aa23.53■■□□□ 1.36
HDAC3-201ENST00000305264 ZNF679Q8IYX0 411 aa23.53■■□□□ 1.36
HDAC3-201ENST00000305264 MROQ9BYG7 248 aa23.53■■□□□ 1.36
HDAC3-201ENST00000305264 ELOVL3Q9HB03 270 aa23.53■■□□□ 1.36
HDAC3-201ENST00000305264 C5orf49A4QMS7 147 aa23.52■■□□□ 1.36
HDAC3-201ENST00000305264 ABHD16AO95870 558 aa23.52■■□□□ 1.36
HDAC3-201ENST00000305264 APLNRP35414 380 aa23.52■■□□□ 1.36
HDAC3-201ENST00000305264 HGFACQ04756 655 aa23.52■■□□□ 1.36
HDAC3-201ENST00000305264 ECH1Q13011 328 aa23.52■■□□□ 1.36
HDAC3-201ENST00000305264 TAF13Q15543 124 aa23.52■■□□□ 1.36
HDAC3-201ENST00000305264 C3orf36Q3SXR2 165 aa23.52■■□□□ 1.36
HDAC3-201ENST00000305264 KCTD21Q4G0X4 260 aa23.52■■□□□ 1.36
HDAC3-201ENST00000305264 CDONQ4KMG0 1287 aa23.52■■□□□ 1.36
HDAC3-201ENST00000305264 RHOUQ7L0Q8 258 aa23.52■■□□□ 1.36
HDAC3-201ENST00000305264 CCDC90BQ9GZT6 254 aa23.52■■□□□ 1.36
HDAC3-201ENST00000305264 CCNOP22674 350 aa23.52■■□□□ 1.36
HDAC3-201ENST00000305264 KRTAP27-1Q3LI81 207 aa23.52■■□□□ 1.36
HDAC3-201ENST00000305264 ISG20L2Q9H9L3 353 aaKnown RBP23.52■■□□□ 1.36
HDAC3-201ENST00000305264 F5H5K5 113 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 SIAH2O43255 324 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 TNFAIP8O95379 198 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 PTHP01270 115 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 EPXP11678 715 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 GDI2P50395 445 aaKnown RBP23.51■■□□□ 1.35
HDAC3-201ENST00000305264 OR12D2P58182 307 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 GRB2P62993 217 aaKnown RBP23.51■■□□□ 1.35
HDAC3-201ENST00000305264 SPOCK1Q08629 439 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 OR2G6Q5TZ20 316 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 PRSS48Q7RTY5 328 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 C4orf36Q96KX1 117 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 CDCA4Q9BXL8 241 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 NGBQ9NPG2 151 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 ACOXLQ9NUZ1 547 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 GNG8Q9UK08 70 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 DPRXA6NFQ7 191 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 TRIM64A6NGJ6 449 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 KRT8P05787 483 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 CD40P25942 277 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 HSD11B1P28845 292 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 CALCRP30988 508 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 OTX1P32242 354 aaPredicted RBP23.51■■□□□ 1.35
HDAC3-201ENST00000305264 PRKXP51817 358 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 ACTA2P62736 377 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 ACTG2P63267 376 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 NAAAQ02083 359 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 BSPH1Q075Z2 132 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 TBC1D28Q2M2D7 210 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 HIST2H2ABQ8IUE6 130 aaPredicted RBP23.51■■□□□ 1.35
HDAC3-201ENST00000305264 KCNJ15Q99712 375 aa23.51■■□□□ 1.35
HDAC3-201ENST00000305264 DEGS2Q6QHC5 323 aa23.5■■□□□ 1.35
HDAC3-201ENST00000305264 TMEM108Q6UXF1 575 aa23.5■■□□□ 1.35
HDAC3-201ENST00000305264 YIPF7Q8N8F6 280 aa23.5■■□□□ 1.35
HDAC3-201ENST00000305264 NR1H4Q96RI1 486 aaPredicted RBP23.5■■□□□ 1.35
HDAC3-201ENST00000305264 CHCHD3Q9NX63 227 aaKnown RBP23.5■■□□□ 1.35
HDAC3-201ENST00000305264 PKDREJQ9NTG1 2253 aa23.5■■□□□ 1.35
HDAC3-201ENST00000305264 IGHV2OR16-5A0A0B4J2B6 119 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.49■■□□□ 1.35
HDAC3-201ENST00000305264 METTL15A6NJ78 407 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 M0R135 149 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 RIDAP52758 137 aaKnown RBP23.49■■□□□ 1.35
HDAC3-201ENST00000305264 IRF3Q14653 427 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 SPTSSAQ969W0 71 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 ZNF799Q96GE5 643 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 PLPPR2Q96GM1 343 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 J3QLW9 94 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 CASKO14936 926 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 SULT1C4O75897 302 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 ACSM4P0C7M7 580 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 ZNF19P17023 458 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 ANOS1P23352 680 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 RNLSQ5VYX0 342 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 NAA40Q86UY6 237 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 KLHL36Q8N4N3 616 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 FAM222BQ8WU58 562 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 CDH20Q9HBT6 801 aa23.49■■□□□ 1.35
HDAC3-201ENST00000305264 CAB39Q9Y376 341 aaPredicted RBP23.49■■□□□ 1.35
HDAC3-201ENST00000305264 DEFB108AA8MXU0 73 aa23.48■■□□□ 1.35
HDAC3-201ENST00000305264 ZNF254O75437 659 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms