RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 KLHDC2Q9Y2U9 406 aa21.15■□□□□ 0.98
HOXC9-201ENST00000303450 GRIP1Q9Y3R0 1128 aa21.15■□□□□ 0.98
HOXC9-201ENST00000303450 F5H5K5 113 aa21.14■□□□□ 0.98
HOXC9-201ENST00000303450 HS3ST1O14792 307 aa21.14■□□□□ 0.98
HOXC9-201ENST00000303450 FAM157BP0CG42 384 aa21.14■□□□□ 0.98
HOXC9-201ENST00000303450 DBTP11182 482 aaKnown RBP21.14■□□□□ 0.98
HOXC9-201ENST00000303450 PCSK6P29122 969 aa21.14■□□□□ 0.98
HOXC9-201ENST00000303450 CDK5R2Q13319 367 aa21.14■□□□□ 0.98
HOXC9-201ENST00000303450 UNQ6126/PRO20091Q6UXV3 157 aa21.14■□□□□ 0.98
HOXC9-201ENST00000303450 NUP37Q8NFH4 326 aa21.14■□□□□ 0.98
HOXC9-201ENST00000303450 FBXW5Q969U6 566 aa21.14■□□□□ 0.98
HOXC9-201ENST00000303450 C4orf45Q96LM5 186 aa21.14■□□□□ 0.98
HOXC9-201ENST00000303450 DCLRE1CQ96SD1 692 aaKnown RBP21.14■□□□□ 0.98
HOXC9-201ENST00000303450 ZNF184Q99676 751 aaPredicted RBP21.14■□□□□ 0.98
HOXC9-201ENST00000303450 OR51B6Q9H340 312 aa21.14■□□□□ 0.98
HOXC9-201ENST00000303450 CACNA1DQ01668 2161 aa21.14■□□□□ 0.97
HOXC9-201ENST00000303450 E7EQL1 145 aa21.14■□□□□ 0.97
HOXC9-201ENST00000303450 ABHD16AO95870 558 aa21.14■□□□□ 0.97
HOXC9-201ENST00000303450 RAD52P43351 418 aa21.14■□□□□ 0.97
HOXC9-201ENST00000303450 UCP2P55851 309 aa21.14■□□□□ 0.97
HOXC9-201ENST00000303450 KCTD18Q6PI47 426 aaPredicted RBP21.14■□□□□ 0.97
HOXC9-201ENST00000303450 VHLLQ6RSH7 139 aa21.14■□□□□ 0.97
HOXC9-201ENST00000303450 RHOUQ7L0Q8 258 aa21.14■□□□□ 0.97
HOXC9-201ENST00000303450 OR10H4Q8NGA5 316 aa21.14■□□□□ 0.97
HOXC9-201ENST00000303450 ASB17Q8WXJ9 295 aa21.14■□□□□ 0.97
HOXC9-201ENST00000303450 ELOVL3Q9HB03 270 aa21.14■□□□□ 0.97
HOXC9-201ENST00000303450 CA10Q9NS85 328 aa21.14■□□□□ 0.97
HOXC9-201ENST00000303450 RAB26Q9ULW5 256 aa21.14■□□□□ 0.97
HOXC9-201ENST00000303450 COPS3Q9UNS2 423 aa21.14■□□□□ 0.97
HOXC9-201ENST00000303450 ZNF670-ZNF695F2Z2N8 137 aa21.13■□□□□ 0.97
HOXC9-201ENST00000303450 PHYHO14832 338 aa21.13■□□□□ 0.97
HOXC9-201ENST00000303450 H2BFMP0C1H6 154 aa21.13■□□□□ 0.97
HOXC9-201ENST00000303450 OR2T7P0C7T2 308 aa21.13■□□□□ 0.97
HOXC9-201ENST00000303450 WNT5AP41221 380 aa21.13■□□□□ 0.97
HOXC9-201ENST00000303450 TPTEP56180 551 aa21.13■□□□□ 0.97
HOXC9-201ENST00000303450 KRTAP10-9P60411 292 aa21.13■□□□□ 0.97
HOXC9-201ENST00000303450 CXCR4P61073 352 aa21.13■□□□□ 0.97
HOXC9-201ENST00000303450 GRB2P62993 217 aaKnown RBP21.13■□□□□ 0.97
HOXC9-201ENST00000303450 NKX6-1P78426 367 aaPredicted RBP21.13■□□□□ 0.97
HOXC9-201ENST00000303450 RSPO1Q2MKA7 263 aaPredicted RBP21.13■□□□□ 0.97
HOXC9-201ENST00000303450 HIST2H2ABQ8IUE6 130 aaPredicted RBP21.13■□□□□ 0.97
HOXC9-201ENST00000303450 ZNF101Q8IZC7 436 aa21.13■□□□□ 0.97
HOXC9-201ENST00000303450 OR2T27Q8NH04 317 aa21.13■□□□□ 0.97
HOXC9-201ENST00000303450 IPCEF1Q8WWN9 437 aaPredicted RBP21.13■□□□□ 0.97
HOXC9-201ENST00000303450 TBX5Q99593 518 aa21.13■□□□□ 0.97
HOXC9-201ENST00000303450 ANKRD60Q9BZ19 345 aa21.13■□□□□ 0.97
HOXC9-201ENST00000303450 BCL2L14Q9BZR8 327 aa21.13■□□□□ 0.97
HOXC9-201ENST00000303450 ABCA12Q86UK0 2595 aa21.13■□□□□ 0.97
HOXC9-201ENST00000303450 HSD11B1P28845 292 aa21.12■□□□□ 0.97
HOXC9-201ENST00000303450 OPRL1P41146 370 aa21.12■□□□□ 0.97
HOXC9-201ENST00000303450 RPS23P62266 143 aaKnown RBP21.12■□□□□ 0.97
HOXC9-201ENST00000303450 KRTAP27-1Q3LI81 207 aa21.12■□□□□ 0.97
HOXC9-201ENST00000303450 KRT77Q7Z794 578 aa21.12■□□□□ 0.97
HOXC9-201ENST00000303450 FBLIM1Q8WUP2 373 aa21.12■□□□□ 0.97
HOXC9-201ENST00000303450 LGALS12Q96DT0 336 aa21.12■□□□□ 0.97
HOXC9-201ENST00000303450 KCNJ15Q99712 375 aa21.12■□□□□ 0.97
HOXC9-201ENST00000303450 DHRS9Q9BPW9 319 aa21.12■□□□□ 0.97
HOXC9-201ENST00000303450 TTTY10Q9BZA0 68 aa21.12■□□□□ 0.97
HOXC9-201ENST00000303450 PCDHGB1Q9Y5G3 927 aa21.12■□□□□ 0.97
HOXC9-201ENST00000303450 AKAP6Q13023 2319 aa21.12■□□□□ 0.97
HOXC9-201ENST00000303450 VSTM5A8MXK1 200 aa21.11■□□□□ 0.97
HOXC9-201ENST00000303450 M0R135 149 aa21.11■□□□□ 0.97
HOXC9-201ENST00000303450 ICMTO60725 284 aa21.11■□□□□ 0.97
HOXC9-201ENST00000303450 LCKP06239 509 aa21.11■□□□□ 0.97
HOXC9-201ENST00000303450 MYF6P23409 242 aa21.11■□□□□ 0.97
HOXC9-201ENST00000303450 GLRXP35754 106 aa21.11■□□□□ 0.97
HOXC9-201ENST00000303450 RAB40BQ12829 278 aa21.11■□□□□ 0.97
HOXC9-201ENST00000303450 KLHL22Q53GT1 634 aa21.11■□□□□ 0.97
HOXC9-201ENST00000303450 ZNF322Q6U7Q0 402 aaPredicted RBP21.11■□□□□ 0.97
HOXC9-201ENST00000303450 LRRN1Q6UXK5 716 aa21.11■□□□□ 0.97
HOXC9-201ENST00000303450 ABHD4Q8TB40 342 aa21.11■□□□□ 0.97
HOXC9-201ENST00000303450 ZNF799Q96GE5 643 aa21.11■□□□□ 0.97
HOXC9-201ENST00000303450 MROQ9BYG7 248 aa21.11■□□□□ 0.97
HOXC9-201ENST00000303450 TBCCD1Q9NVR7 557 aa21.11■□□□□ 0.97
HOXC9-201ENST00000303450 EXOGQ9Y2C4 368 aaKnown RBP21.11■□□□□ 0.97
HOXC9-201ENST00000303450 A0A1W2PQL4 384 aaPredicted RBP21.1■□□□□ 0.97
HOXC9-201ENST00000303450 GPRIN2O60269 458 aa21.1■□□□□ 0.97
HOXC9-201ENST00000303450 SMPD2O60906 423 aa21.1■□□□□ 0.97
HOXC9-201ENST00000303450 FADS2O95864 444 aaKnown RBP21.1■□□□□ 0.97
HOXC9-201ENST00000303450 ACSM4P0C7M7 580 aa21.1■□□□□ 0.97
HOXC9-201ENST00000303450 THBS4P35443 961 aa21.1■□□□□ 0.97
HOXC9-201ENST00000303450 SLC6A9P48067 706 aa21.1■□□□□ 0.97
HOXC9-201ENST00000303450 RGS6P49758 472 aa21.1■□□□□ 0.97
HOXC9-201ENST00000303450 FABP6P51161 128 aa21.1■□□□□ 0.97
HOXC9-201ENST00000303450 PRKXP51817 358 aa21.1■□□□□ 0.97
HOXC9-201ENST00000303450 ACTC1P68032 377 aa21.1■□□□□ 0.97
HOXC9-201ENST00000303450 ACTA1P68133 377 aa21.1■□□□□ 0.97
HOXC9-201ENST00000303450 ZNF544Q6NX49 715 aa21.1■□□□□ 0.97
HOXC9-201ENST00000303450 RFLNBQ8N5W9 214 aa21.1■□□□□ 0.97
HOXC9-201ENST00000303450 ZNF611Q8N823 705 aa21.1■□□□□ 0.97
HOXC9-201ENST00000303450 OR1J1Q8NGS3 322 aa21.1■□□□□ 0.97
HOXC9-201ENST00000303450 ZNF442Q9H7R0 627 aa21.1■□□□□ 0.97
HOXC9-201ENST00000303450 FAIMQ9NVQ4 179 aa21.1■□□□□ 0.97
HOXC9-201ENST00000303450 IKZF2Q9UKS7 526 aa21.1■□□□□ 0.97
HOXC9-201ENST00000303450 PSMD9O00233 223 aa21.09■□□□□ 0.97
HOXC9-201ENST00000303450 NGFP01138 241 aa21.09■□□□□ 0.97
HOXC9-201ENST00000303450 APOBEC3AP31941 199 aaPredicted RBP21.09■□□□□ 0.97
HOXC9-201ENST00000303450 OTX1P32242 354 aaPredicted RBP21.09■□□□□ 0.97
HOXC9-201ENST00000303450 RFPL4BQ6ZWI9 263 aa21.09■□□□□ 0.97
HOXC9-201ENST00000303450 C1orf174Q8IYL3 243 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms