RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 CCNB1IP1Q9NPC3 277 aa8.22□□□□□ -1.09
RFX3-201ENST00000302303 SCN3BQ9NY72 215 aa8.22□□□□□ -1.09
RFX3-201ENST00000302303 CRIM1Q9NZV1 1036 aa8.22□□□□□ -1.09
RFX3-201ENST00000302303 LRP12Q9Y561 859 aa8.22□□□□□ -1.09
RFX3-201ENST00000302303 PCDHGB1Q9Y5G3 927 aa8.22□□□□□ -1.09
RFX3-201ENST00000302303 GCN1Q92616 2671 aaKnown RBP8.21□□□□□ -1.09
RFX3-201ENST00000302303 LRRK2Q5S007 2527 aa8.21□□□□□ -1.09
RFX3-201ENST00000302303 DAPL1A0PJW8 107 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 TUBAL3A6NHL2 446 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 ZNF670-ZNF695F2Z2N8 137 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 DOK2O60496 412 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 ICMTO60725 284 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 TMCC2O75069 709 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 PTHP01270 115 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 ACSM4P0C7M7 580 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 SMIM18P0DKX4 95 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 EPXP11678 715 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 STOMP27105 288 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 ATP6V1E1P36543 226 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 MAP2K4P45985 399 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 CAPZA2P47755 286 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 ZNF83P51522 516 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 EMX1Q04741 257 aaPredicted RBP8.21□□□□□ -1.1
RFX3-201ENST00000302303 SPOCK1Q08629 439 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 TP53I3Q53FA7 332 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 LIPNQ5VXI9 398 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 TMEM53Q6P2H8 277 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 DEGS2Q6QHC5 323 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 PLEKHG7Q6ZR37 379 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 ASB17Q8WXJ9 295 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 RORBQ92753 470 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 PELI1Q96FA3 418 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 DACH2Q96NX9 599 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 OR5M11Q96RB7 305 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 NR1H4Q96RI1 486 aaPredicted RBP8.21□□□□□ -1.1
RFX3-201ENST00000302303 COQ7Q99807 217 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 ATF6BQ99941 703 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 ALG8Q9BVK2 526 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 HDHD2Q9H0R4 259 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 KCNN2Q9H2S1 579 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 ELOVL3Q9HB03 270 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 INPP5EQ9NRR6 644 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 CENPMQ9NSP4 180 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 ATPIF1Q9UII2 106 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 POLR1DQ9Y2S0 133 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 SIRT4Q9Y6E7 314 aaPredicted RBP8.21□□□□□ -1.1
RFX3-201ENST00000302303 TMEM14AQ9Y6G1 99 aa8.21□□□□□ -1.1
RFX3-201ENST00000302303 HRNRQ86YZ3 2850 aaPredicted RBP8.21□□□□□ -1.1
RFX3-201ENST00000302303 IGHV2OR16-5A0A0B4J2B6 119 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 A0A1W2PPR1 153 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 TMEM129A0AVI4 362 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 IRGMA1A4Y4 181 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 FAM221AA4D161 298 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 METTL15A6NJ78 407 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 ZNF878C9JN71 531 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 RGS10O43665 173 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 SULT1C4O75897 302 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 NGFP01138 241 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 CD40P25942 277 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 DCTDP32321 178 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 HTR5AP47898 357 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 NANOS3P60323 173 aaKnown RBP8.2□□□□□ -1.1
RFX3-201ENST00000302303 ACTC1P68032 377 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 ACTA1P68133 377 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 NAAAQ02083 359 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 MFGE8Q08431 387 aaPredicted RBP8.2□□□□□ -1.1
RFX3-201ENST00000302303 MSMPQ1L6U9 139 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 TMEM255AQ5JRV8 349 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 NCMAPQ5T1S8 102 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 WFDC8Q8IUA0 241 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 EGFL6Q8IUX8 553 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 ZNF101Q8IZC7 436 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 SYS1Q8N2H4 156 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 STX19Q8N4C7 294 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 SLC30A7Q8NEW0 376 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 IL17RDQ8NFM7 739 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 LILRB1Q8NHL6 650 aaPredicted RBP8.2□□□□□ -1.1
RFX3-201ENST00000302303 RPS4Y2Q8TD47 263 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 SPRYD4Q8WW59 207 aaPredicted RBP8.2□□□□□ -1.1
RFX3-201ENST00000302303 NANOS1Q8WY41 292 aaKnown RBP8.2□□□□□ -1.1
RFX3-201ENST00000302303 MYDGFQ969H8 173 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 MUCL1Q96DR8 90 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 C4orf36Q96KX1 117 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 HS3ST6Q96QI5 342 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 KCNJ15Q99712 375 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 MED18Q9BUE0 208 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 TMUB1Q9BVT8 246 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 ACOXLQ9NUZ1 547 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 FAM206AQ9NX38 181 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 NDRG3Q9UGV2 375 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 CAB39Q9Y376 341 aaPredicted RBP8.2□□□□□ -1.1
RFX3-201ENST00000302303 EXOSC1Q9Y3B2 195 aaKnown RBP8.2□□□□□ -1.1
RFX3-201ENST00000302303 GRIP1Q9Y3R0 1128 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 USP9YO00507 2555 aaPredicted RBP8.2□□□□□ -1.1
RFX3-201ENST00000302303 FBN2P35556 2912 aa8.2□□□□□ -1.1
RFX3-201ENST00000302303 CRYBG3Q68DQ2 2970 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.19□□□□□ -1.1
RFX3-201ENST00000302303 F5H5K5 113 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 M0R1B8 84 aa8.19□□□□□ -1.1
RFX3-201ENST00000302303 PHYHO14832 338 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms