RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 MEIKINA0A087WXM9 373 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ETHE1O95571 254 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CTSLP07711 333 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 GPR12P47775 334 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 C4orf17Q53FE4 359 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RELL2Q8NC24 303 aaPredicted RBP12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 C11orf40Q8WZ69 217 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TCEAL7Q9BRU2 100 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RHNO1Q9BSD3 238 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TOX4O94842 621 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 NTF3P20783 257 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 DUSP1P28562 367 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 FCER1GP30273 86 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SRPXP78539 464 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ZNF816Q0VGE8 651 aaPredicted RBP12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PHYHD1Q5SRE7 291 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 NLRC3Q7RTR2 1065 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OR5M9Q8NGP3 310 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ELSPBP1Q96BH3 223 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CCDC74BQ96LY2 380 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 FLVCR1Q9Y5Y0 555 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SEC14L6B5MCN3 397 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 MT-ATP6P00846 226 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 GPX2P18283 190 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ELAVL1Q15717 326 aaKnown RBP12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TIGD3Q6B0B8 471 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 FAM122CQ6P4D5 195 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 BCO1Q9HAY6 547 aa12.35□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RGS11O94810 467 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 XKR7Q5GH72 579 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OR2L13Q8N349 312 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OR52N5Q8NH56 324 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 UBALD1Q8TB05 177 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ARRDC1-AS1Q9H2J1 176 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 B3GALT5Q9Y2C3 310 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TNFSF15O95150 251 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 GPANK1O95872 356 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CPEP16870 476 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 HRH1P35367 487 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RAC1P63000 192 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SYT6Q5T7P8 510 aaPredicted RBP12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ADAM5Q6NVV9 412 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SLC51BQ86UW2 128 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OR6K3Q8NGY3 331 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ZNF416Q9BWM5 594 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 IKZF5Q9H5V7 419 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 A0A1W2PR80 420 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 GPR37O15354 613 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CXCL13O43927 109 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ICMTO60725 284 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 B4GALT1P15291 398 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SDHAP31040 664 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 Q6ZRG5 221 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CMTM4Q8IZR5 234 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PRSS35Q8N3Z0 413 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 C16orf52Q8NHV5 167 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SLC7A6Q92536 515 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 BARX1Q9HBU1 254 aaPredicted RBP12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SLC17A4Q9Y2C5 497 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OR2C1O95371 312 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 FABP5Q01469 135 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 UCN3Q969E3 161 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 ISYNA1Q9NPH2 558 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PLEKHB1Q9UF11 243 aaPredicted RBP12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CLDN15P56746 228 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 INSM1Q01101 510 aaPredicted RBP12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 PRR27Q6MZM9 219 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 TFAP2EQ6VUC0 442 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 CADM3Q8N126 398 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OPALINQ96PE5 141 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SPACA1Q9HBV2 294 aa12.34□□□□□ -0.43
CHRFAM7A-201ENST00000299847 C20orf202A1L168 122 aa12.33□□□□□ -0.43
CHRFAM7A-201ENST00000299847 SH2D1BO14796 132 aa12.33□□□□□ -0.43
CHRFAM7A-201ENST00000299847 HIST2H3AQ71DI3 136 aa12.33□□□□□ -0.43
CHRFAM7A-201ENST00000299847 OR10Z1Q8NGY1 313 aa12.33□□□□□ -0.43
CHRFAM7A-201ENST00000299847 RPUSD4Q96CM3 377 aaKnown RBP12.33□□□□□ -0.43
CHRFAM7A-201ENST00000299847 NRASP01111 189 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 NID1P14543 1247 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ACHEP22303 614 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 S100A7P31151 101 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ASCL1P50553 236 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 HMGN3Q15651 99 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 DEFB123Q8N688 67 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 NKX6-2Q9C056 277 aaPredicted RBP12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 C19orf53Q9UNZ5 99 aaPredicted RBP12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 A0A1W2PPH5 198 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 HAAOP46952 286 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 FAM74A1Q5RGS3 127 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TMEM268Q5VZI3 342 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 AFMIDQ63HM1 303 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 GABRG1Q8N1C3 465 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SCARB1Q8WTV0 552 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 TMED6Q8WW62 240 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 ARL2-SNX15V9GYD0 113 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 A0A087WZY1 265 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SCO1O75880 301 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 SPINK2P20155 84 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 GUCA2AQ02747 115 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 MYBPHQ13203 477 aa12.33□□□□□ -0.44
CHRFAM7A-201ENST00000299847 KIAA0141Q14154 515 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms