RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 GPX7Q96SL4 187 aaPredicted RBP12.09□□□□□ -0.47
CTDP1-202ENST00000299543 VDAC3Q9Y277 283 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 COA3Q9Y2R0 106 aaPredicted RBP12.09□□□□□ -0.47
CTDP1-202ENST00000299543 EMC9Q9Y3B6 208 aa12.09□□□□□ -0.47
CTDP1-202ENST00000299543 FITM1A5D6W6 292 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 OR14I1A6ND48 311 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 WNT11O96014 354 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 CLPSP04118 112 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 NQO2P16083 231 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 ARRB1P49407 418 aaPredicted RBP12.08□□□□□ -0.48
CTDP1-202ENST00000299543 RAP2BP61225 183 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 MFGE8Q08431 387 aaPredicted RBP12.08□□□□□ -0.48
CTDP1-202ENST00000299543 RASGEF1BQ0VAM2 473 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 OR2B11Q5JQS5 317 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 SLC18B1Q6NT16 456 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 MUC20Q8N307 709 aaPredicted RBP12.08□□□□□ -0.48
CTDP1-202ENST00000299543 EXD3Q8N9H8 876 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 FAM46BQ96A09 425 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 SGK3Q96BR1 496 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 SLC25A44Q96H78 314 aaPredicted RBP12.08□□□□□ -0.48
CTDP1-202ENST00000299543 SEC22AQ96IW7 307 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 MESP1Q9BRJ9 268 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 PLEKHA1Q9HB21 404 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 TAS2R4Q9NYW5 299 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 F5H0A9 414 aaPredicted RBP12.08□□□□□ -0.48
CTDP1-202ENST00000299543 FADS1O60427 444 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 H2AFB1P0C5Y9 115 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 NDUFB7P17568 137 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 GNALP38405 381 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 OR2B8PP59922 312 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 IGLV3-21P80748 117 aaPredicted RBP12.08□□□□□ -0.48
CTDP1-202ENST00000299543 SLC17A1Q14916 467 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 UNQ6494/PRO21346Q6UXR6 183 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 ZNF546Q86UE3 836 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 ZNF565Q8N9K5 539 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 CHST4Q8NCG5 386 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 FAM71CQ8NEG0 241 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 OR51A2Q8NGJ7 313 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 ZNF587Q96SQ5 575 aaPredicted RBP12.08□□□□□ -0.48
CTDP1-202ENST00000299543 DCAF16Q9NXF7 216 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 CKLFQ9UBR5 152 aa12.08□□□□□ -0.48
CTDP1-202ENST00000299543 TMED7-TICAM2A0A0A6YYA0 188 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 OR2M5A3KFT3 312 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 C2CD4DB7Z1M9 353 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 H7C417 338 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 CD2P06729 351 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 IL11P20809 199 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 MRPS10P82664 201 aaKnown RBP12.07□□□□□ -0.48
CTDP1-202ENST00000299543 FMODQ06828 376 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 EIF2S3LQ2VIR3 472 aaKnown RBP12.07□□□□□ -0.48
CTDP1-202ENST00000299543 SDK2Q58EX2 2172 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 ZNF626Q68DY1 528 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 LANCL3Q6ZV70 420 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 CD163Q86VB7 1156 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 CMTM3Q96MX0 182 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 C8orf33Q9H7E9 229 aaPredicted RBP12.07□□□□□ -0.48
CTDP1-202ENST00000299543 BARX1Q9HBU1 254 aaPredicted RBP12.07□□□□□ -0.48
CTDP1-202ENST00000299543 COPS7AQ9UBW8 275 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 MTFP1Q9UDX5 166 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 TMED7Q9Y3B3 224 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 ETV7Q9Y603 341 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 TRBV5-5A0A0J9YX44 114 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 PRSS37A4D1T9 235 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 H0YIG0 161 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 AMY2AP04746 511 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 CD1AP06126 327 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 APEHP13798 732 aaKnown RBP12.07□□□□□ -0.48
CTDP1-202ENST00000299543 ZNF28P17035 718 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 IGFBP4P22692 258 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 RIDAP52758 137 aaKnown RBP12.07□□□□□ -0.48
CTDP1-202ENST00000299543 DLX5P56178 289 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 ISXQ2M1V0 245 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 DMRTC1Q5HYR2 192 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 ELFN2Q5R3F8 820 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 GKN2Q86XP6 184 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 MFRPQ9BY79 579 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 TRAV36DV7A0A075B6V5 113 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.07□□□□□ -0.48
CTDP1-202ENST00000299543 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.07□□□□□ -0.48
CTDP1-202ENST00000299543 KANTRA0A1W2PQU2 76 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 SHISA8B8ZZ34 492 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 H3BML4 177 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 ZNF823P16415 610 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 PGCP20142 388 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 S100PP25815 95 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 INSM1Q01101 510 aaPredicted RBP12.07□□□□□ -0.48
CTDP1-202ENST00000299543 LIN54Q6MZP7 749 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 STEAP1BQ6NZ63 245 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 SLC29A4Q7RTT9 530 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 BIVMQ86UB2 503 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.07□□□□□ -0.48
CTDP1-202ENST00000299543 ACBD4Q8NC06 268 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 ZNF248Q8NDW4 579 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 OR1J4Q8NGS1 313 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 C14orf79Q96F83 325 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 C5orf34Q96MH7 638 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 OR8B4Q96RC9 309 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 NUDT22Q9BRQ3 303 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 ABHD6Q9BV23 337 aa12.07□□□□□ -0.48
CTDP1-202ENST00000299543 LANCL2Q9NS86 450 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms