RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 MED25Q71SY5 747 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 SLC38A6Q8IZM9 456 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 OR2G2Q8NGZ5 317 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 EMG1Q92979 244 aaKnown RBP13.59□□□□□ -0.23
SCN3B-201ENST00000299333 OPALINQ96PE5 141 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 DEDDO75618 318 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 SMIM6P0DI80 62 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 CD1EP15812 388 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 ACOT6Q3I5F7 207 aaPredicted RBP13.59□□□□□ -0.23
SCN3B-201ENST00000299333 ZNF429Q86V71 674 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 C19orf47Q8N9M1 422 aaKnown RBP13.59□□□□□ -0.23
SCN3B-201ENST00000299333 OR5K2Q8NHB8 316 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 MARCH1Q8TCQ1 289 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 NUDCD2Q8WVJ2 157 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 TMEM40Q8WWA1 233 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 RSRP1Q9BUV0 290 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 MAGT1Q9H0U3 335 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 SFXN1Q9H9B4 322 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 WSB2Q9NYS7 404 aaPredicted RBP13.59□□□□□ -0.23
SCN3B-201ENST00000299333 MMP24Q9Y5R2 645 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 ARFGEF2Q9Y6D5 1785 aa13.59□□□□□ -0.23
SCN3B-201ENST00000299333 TEX50A0A1B0GTY4 177 aa13.58□□□□□ -0.23
SCN3B-201ENST00000299333 HRH1P35367 487 aa13.58□□□□□ -0.23
SCN3B-201ENST00000299333 RAB38P57729 211 aa13.58□□□□□ -0.23
SCN3B-201ENST00000299333 SLCO4C1Q6ZQN7 724 aa13.58□□□□□ -0.23
SCN3B-201ENST00000299333 ZNF740Q8NDX6 193 aa13.58□□□□□ -0.23
SCN3B-201ENST00000299333 SLC39A7Q92504 469 aa13.58□□□□□ -0.23
SCN3B-201ENST00000299333 MS4A10Q96PG2 267 aa13.58□□□□□ -0.23
SCN3B-201ENST00000299333 INSM2Q96T92 566 aaPredicted RBP13.58□□□□□ -0.23
SCN3B-201ENST00000299333 GNB4Q9HAV0 340 aa13.58□□□□□ -0.23
SCN3B-201ENST00000299333 LHX6Q9UPM6 363 aa13.58□□□□□ -0.23
SCN3B-201ENST00000299333 LOC107986453A0A1B0GWG9 222 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 FBLL1A6NHQ2 334 aaKnown RBP13.58□□□□□ -0.24
SCN3B-201ENST00000299333 XRCC2O43543 280 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 OR7C2O60412 319 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 SLC25A4P12235 298 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 PMS2P11Q13670 270 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 OR2L13Q8N349 312 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 OR10G3Q8NGC4 313 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 OR2AE1Q8NHA4 323 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 LILRB1Q8NHL6 650 aaPredicted RBP13.58□□□□□ -0.24
SCN3B-201ENST00000299333 UBTD2Q8WUN7 234 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 SLC35E1Q96K37 410 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 C2orf50Q96LR7 162 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 COL14A1Q05707 1796 aaKnown RBP13.58□□□□□ -0.24
SCN3B-201ENST00000299333 DEGS1O15121 323 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 SLC25A6P12236 298 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 NTHL1P78549 312 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 EXD3Q8N9H8 876 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 OR10P1Q8NGE3 313 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 OR11L1Q8NGX0 322 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 GPA33Q99795 319 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 POMT2Q9UKY4 750 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 NOSIPQ9Y314 301 aaKnown RBP13.58□□□□□ -0.24
SCN3B-201ENST00000299333 MYH3P11055 1940 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 PRSS38A1L453 326 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 ACAA2P42765 397 aaKnown RBP13.58□□□□□ -0.24
SCN3B-201ENST00000299333 CSN1S1P47710 185 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 UQCC3Q6UW78 93 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 LYG2Q86SG7 212 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 GALNT16Q8N428 558 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 RNF150Q9ULK6 438 aa13.58□□□□□ -0.24
SCN3B-201ENST00000299333 A0A1B0GV72 72 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 M0QZQ0 153 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 RBP2P50120 134 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 RAC1P63000 192 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 SLC46A1Q96NT5 459 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 BARHL1Q9BZE3 327 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 SOX18P35713 384 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 SLC35A1P78382 337 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 NCMAPQ5T1S8 102 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 OR2A2Q6IF42 318 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 C5orf46Q6UWT4 87 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 DHRS13Q6UX07 377 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 WDR88Q6ZMY6 472 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 OR8D4Q8NGM9 314 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 MBD3L1Q8WWY6 194 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 DUSP21Q9H596 190 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 KIR2DS1A0A191URI9 304 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 SLC22A20A6NK97 555 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 TAPBPO15533 448 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 SIAH2O43255 324 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 KIR2DS4P43632 304 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 KIR2DS1Q14954 304 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 ZNF595Q8IYB9 648 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 BHLHE23Q8NDY6 225 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 H1FXQ92522 213 aaKnown RBP13.57□□□□□ -0.24
SCN3B-201ENST00000299333 HINT3Q9NQE9 182 aaKnown RBP13.57□□□□□ -0.24
SCN3B-201ENST00000299333 TMEM184BQ9Y519 407 aaPredicted RBP13.57□□□□□ -0.24
SCN3B-201ENST00000299333 CCDC187A0A096LP49 1063 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 M0R1X1 148 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 CSF2RAP15509 400 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 TAS2R45P59539 299 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 CTBSQ01459 385 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 ZNF154Q13106 437 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 OR8B8Q15620 311 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 ZNF485Q8NCK3 441 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 GABARAPL3Q9BY60 117 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 GPR160Q9UJ42 338 aa13.57□□□□□ -0.24
SCN3B-201ENST00000299333 CA14Q9ULX7 337 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms