RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 TCEANCQ8N8B7 351 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 POMGNT2Q8NAT1 580 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 OR52E2Q8NGJ4 325 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 FBLIM1Q8WUP2 373 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 RFKQ969G6 155 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 ZNF566Q969W8 418 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 BOD1Q96IK1 185 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 RBP7Q96R05 134 aa13.36□□□□□ -0.27
UBXN1-201ENST00000294119 YTHDF1Q9BYJ9 559 aaKnown RBP13.36□□□□□ -0.27
UBXN1-201ENST00000294119 VSX1Q9NZR4 365 aaPredicted RBP13.36□□□□□ -0.27
UBXN1-201ENST00000294119 TMEM129A0AVI4 362 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 PRSS37A4D1T9 235 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 SLC43A1O75387 559 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 RNASE1P07998 156 aaKnown RBP13.35□□□□□ -0.27
UBXN1-201ENST00000294119 GNAO1P09471 354 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 CRABP1P29762 137 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 SLC25A1P53007 311 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 CLDN17P56750 224 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 CXCR4P61073 352 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 TMED1Q13445 227 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 MAD2L1BPQ15013 274 aaPredicted RBP13.35□□□□□ -0.27
UBXN1-201ENST00000294119 ZNF362Q5T0B9 420 aaPredicted RBP13.35□□□□□ -0.27
UBXN1-201ENST00000294119 THEM4Q5T1C6 240 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 DNM1P34Q6PK57 102 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 AAED1Q7RTV5 226 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 ENTHD1Q8IYW4 607 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 UBE2J2Q8N2K1 259 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 ZIC4Q8N9L1 334 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 SLC37A3Q8NCC5 494 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 NPEPL1Q8NDH3 523 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 OR4K13Q8NH42 304 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 TXNDC15Q96J42 360 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 CNBD2Q96M20 576 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 B3GAT2Q9NPZ5 323 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 UPB1Q9UBR1 384 aa13.35□□□□□ -0.27
UBXN1-201ENST00000294119 IGHV1-18A0A0C4DH31 117 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 DNAJC9-AS1A6NH13 148 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 PRODHO43272 600 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 PRKYO43930 277 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 TRMUO75648 421 aaKnown RBP13.34□□□□□ -0.27
UBXN1-201ENST00000294119 ZNF432O94892 652 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 CLIC3O95833 236 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 GABRB1P18505 474 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 ADRA2CP18825 462 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 MDKP21741 143 aaPredicted RBP13.34□□□□□ -0.27
UBXN1-201ENST00000294119 CDKN2AP42771 156 aaKnown RBP13.34□□□□□ -0.27
UBXN1-201ENST00000294119 BLVRAP53004 296 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 CLRN1P58418 232 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 TGFBR3Q03167 851 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 SRSF4Q08170 494 aaKnown RBP13.34□□□□□ -0.27
UBXN1-201ENST00000294119 CDK5R2Q13319 367 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 MESTQ5EB52 335 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 SLC35D3Q5M8T2 416 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 NXNL2Q5VZ03 156 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 LEG1Q6P5S2 330 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 C1QL4Q86Z23 238 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 OR2T4Q8NH00 348 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 NANPQ8TBE9 248 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 WFDC12Q8WWY7 111 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 RASD2Q96D21 266 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 OR2M2Q96R28 347 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 IL4I1Q96RQ9 567 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 DDOQ99489 341 aa13.34□□□□□ -0.27
UBXN1-201ENST00000294119 MRPL13Q9BYD1 178 aaKnown RBP13.34□□□□□ -0.27
UBXN1-201ENST00000294119 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.34□□□□□ -0.27
UBXN1-201ENST00000294119 SLC22A23A1A5C7 686 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 J3QLI3 93 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 ERCC1P07992 297 aaPredicted RBP13.33□□□□□ -0.28
UBXN1-201ENST00000294119 PGA4P0DJD7 388 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 PGA3P0DJD8 388 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 CSNK1A1P48729 337 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 CD47Q08722 323 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 CRMP1Q14194 572 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 MELKQ14680 651 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 HIST3H3Q16695 136 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 ELFN2Q5R3F8 820 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 NIPAL3Q6P499 406 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 LSRQ86X29 649 aaPredicted RBP13.33□□□□□ -0.28
UBXN1-201ENST00000294119 CPOQ8IVL8 374 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 SIGLECL1Q8N7X8 197 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 NOXO1Q8NFA2 376 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 HDAC2Q92769 488 aaKnown RBP13.33□□□□□ -0.28
UBXN1-201ENST00000294119 ZNF385AQ96PM9 386 aaKnown RBP13.33□□□□□ -0.28
UBXN1-201ENST00000294119 NMNAT3Q96T66 252 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 CITED1Q99966 193 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 LINC00470Q9BZP3 86 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 NMNAT2Q9BZQ4 307 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 ZNF442Q9H7R0 627 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 PLCXD1Q9NUJ7 323 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 TREM2Q9NZC2 230 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 OPN4Q9UHM6 478 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 BLOC1S6Q9UL45 172 aa13.33□□□□□ -0.28
UBXN1-201ENST00000294119 SLC22A31A6NKX4 558 aa13.32□□□□□ -0.28
UBXN1-201ENST00000294119 CLDN34H7C241 214 aa13.32□□□□□ -0.28
UBXN1-201ENST00000294119 KRT33AO76009 404 aa13.32□□□□□ -0.28
UBXN1-201ENST00000294119 SLC2A10O95528 541 aa13.32□□□□□ -0.28
UBXN1-201ENST00000294119 CCDC159P0C7I6 412 aa13.32□□□□□ -0.28
UBXN1-201ENST00000294119 PAX7P23759 505 aa13.32□□□□□ -0.28
UBXN1-201ENST00000294119 FPR2P25090 351 aa13.32□□□□□ -0.28
UBXN1-201ENST00000294119 ZNF133P52736 654 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms