RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 RAB26Q9ULW5 256 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 COPS3Q9UNS2 423 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 KLHDC2Q9Y2U9 406 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 RPL36Q9Y3U8 105 aaKnown RBP11.43□□□□□ -0.58
CCDC42-201ENST00000293845 SPEF1Q9Y4P9 236 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 FBN2P35556 2912 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 ARFGEF3Q5TH69 2177 aa11.43□□□□□ -0.58
CCDC42-201ENST00000293845 E7EQL1 145 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 J3QRE1 110 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 HS3ST1O14792 307 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 DBHP09172 617 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 OR2T7P0C7T2 308 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 CCNOP22674 350 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 MYF6P23409 242 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 GLRXP35754 106 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 OPRL1P41146 370 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 WNT5AP41221 380 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 HCCSP53701 268 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 GRB2P62993 217 aaKnown RBP11.42□□□□□ -0.58
CCDC42-201ENST00000293845 CDK5R2Q13319 367 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 SNTB2Q13425 540 aaKnown RBP11.42□□□□□ -0.58
CCDC42-201ENST00000293845 SMN1Q16637 294 aaKnown RBP11.42□□□□□ -0.58
CCDC42-201ENST00000293845 LAIR2Q6ISS4 152 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 C1orf174Q8IYL3 243 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 ZNF101Q8IZC7 436 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 ZNF611Q8N823 705 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 OR2T27Q8NH04 317 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 SMAP2Q8WU79 429 aaPredicted RBP11.42□□□□□ -0.58
CCDC42-201ENST00000293845 THEM6Q8WUY1 208 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 ASB17Q8WXJ9 295 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 FBXW5Q969U6 566 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 C4orf45Q96LM5 186 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 KCNJ15Q99712 375 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 BCL2L14Q9BZR8 327 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 TBCCD1Q9NVR7 557 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 CISD1Q9NZ45 108 aaKnown RBP11.42□□□□□ -0.58
CCDC42-201ENST00000293845 EXOGQ9Y2C4 368 aaKnown RBP11.42□□□□□ -0.58
CCDC42-201ENST00000293845 PCDHGB1Q9Y5G3 927 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 ATP23Q9Y6H3 246 aa11.42□□□□□ -0.58
CCDC42-201ENST00000293845 ZNF670-ZNF695F2Z2N8 137 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 SMPD2O60906 423 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 APOL3O95236 402 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 ABHD16AO95870 558 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 ACSM4P0C7M7 580 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 ATP6V1E1P36543 226 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 RAD52P43351 418 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 SLC15A1P46059 708 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 RGS6P49758 472 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 UCP2P55851 309 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 RPS23P62266 143 aaKnown RBP11.41□□□□□ -0.58
CCDC42-201ENST00000293845 ACTC1P68032 377 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 ACTA1P68133 377 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 ROM1Q03395 351 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 RAB40BQ12829 278 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 KRT80Q6KB66 452 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 ZNF544Q6NX49 715 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 KCTD18Q6PI47 426 aaPredicted RBP11.41□□□□□ -0.58
CCDC42-201ENST00000293845 DEGS2Q6QHC5 323 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 ARL9Q6T311 187 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 UNQ6126/PRO20091Q6UXV3 157 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 COLCA1Q6ZS62 124 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 RFLNBQ8N5W9 214 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 SPTSSAQ969W0 71 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 LGALS12Q96DT0 336 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 OR8B4Q96RC9 309 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 DHRS9Q9BPW9 319 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 COPS4Q9BT78 406 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 ELOVL3Q9HB03 270 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 AMBNQ9NP70 447 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 CA10Q9NS85 328 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 CENPMQ9NSP4 180 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 EIF3KQ9UBQ5 218 aaKnown RBP11.41□□□□□ -0.58
CCDC42-201ENST00000293845 PRR32B1ATL7 298 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 M0R135 149 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 ZNF254O75437 659 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 IGHA1P01876 353 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 FAM157BP0CG42 384 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 TPTEP56180 551 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 KRTAP10-9P60411 292 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 CXCR4P61073 352 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 EGR3Q06889 387 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 TAF13Q15543 124 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 ZNF322Q6U7Q0 402 aaPredicted RBP11.41□□□□□ -0.58
CCDC42-201ENST00000293845 DRAM2Q6UX65 266 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 C20orf204Q6ZNR8 217 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 RFPL4BQ6ZWI9 263 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 OR10H4Q8NGA5 316 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 TMEM171Q8WVE6 324 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 ZNF799Q96GE5 643 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 C1QTNF5Q9BXJ0 243 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 NIPAL2Q9H841 368 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 PLCXD1Q9NUJ7 323 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 GRIP1Q9Y3R0 1128 aa11.41□□□□□ -0.58
CCDC42-201ENST00000293845 APCP25054 2843 aa11.4□□□□□ -0.58
CCDC42-201ENST00000293845 A0A1W2PQL4 384 aaPredicted RBP11.4□□□□□ -0.59
CCDC42-201ENST00000293845 IRGMA1A4Y4 181 aa11.4□□□□□ -0.59
CCDC42-201ENST00000293845 F5H5K5 113 aa11.4□□□□□ -0.59
CCDC42-201ENST00000293845 GPRIN2O60269 458 aa11.4□□□□□ -0.59
CCDC42-201ENST00000293845 FADS2O95864 444 aaKnown RBP11.4□□□□□ -0.59
CCDC42-201ENST00000293845 NGFP01138 241 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms