RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 OR8B8Q15620 311 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 CD300LDQ6UXZ3 194 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 ARHGEF39Q8N4T4 335 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 CPEB3Q8NE35 698 aaKnown RBP11.6□□□□□ -0.55
PTCD1-201ENST00000292478 OR2G2Q8NGZ5 317 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 OR51F2Q8NH61 342 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 YIPF5Q969M3 257 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 SARAFQ96BY9 339 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 RIMS4Q9H426 269 aaPredicted RBP11.6□□□□□ -0.55
PTCD1-201ENST00000292478 ANKRD10Q9NXR5 420 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 ANKRD61A6NGH8 418 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 SERPINF1P36955 418 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 TRA2AQ13595 282 aaKnown RBP eCLIP11.6□□□□□ -0.55
PTCD1-201ENST00000292478 OR8G1Q15617 311 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 OR52W1Q6IF63 320 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 OR2AE1Q8NHA4 323 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 C12orf49Q9H741 205 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 SIRT5Q9NXA8 310 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 TRAPPC4Q9Y296 219 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 LOXL2Q9Y4K0 774 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 A0A0B4J2E0 115 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 CCDC163A0A0D9SF12 145 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 A0A1B0GX12 115 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 RPS10-NUDT3A0A1W2PQS6 291 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 FAM166BA8MTA8 275 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 ZNF705FA8MVS1 300 aaPredicted RBP11.6□□□□□ -0.55
PTCD1-201ENST00000292478 ZNF705DP0CH99 300 aaPredicted RBP11.6□□□□□ -0.55
PTCD1-201ENST00000292478 ZNF705BP0CI00 300 aaPredicted RBP11.6□□□□□ -0.55
PTCD1-201ENST00000292478 RPS10P46783 165 aaKnown RBP11.6□□□□□ -0.55
PTCD1-201ENST00000292478 HMGA2P52926 109 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 HMGCLL1Q8TB92 370 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 TAS2R5Q9NYW4 299 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 DUSP13Q9UII6 198 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 SH3BGRL2Q9UJC5 107 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 NFYBP25208 207 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 NKX2-1P43699 371 aaPredicted RBP11.6□□□□□ -0.55
PTCD1-201ENST00000292478 ZNF85Q03923 595 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 NKG7Q16617 165 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 LTC4SQ16873 150 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 PNLIPRP3Q17RR3 467 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 PHLDA2Q53GA4 152 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 LAIR1Q6GTX8 287 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 ACOT7LQ6ZUV0 252 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 SIRT6Q8N6T7 355 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 PCYT1BQ9Y5K3 369 aaPredicted RBP11.6□□□□□ -0.55
PTCD1-201ENST00000292478 SLCO1B1Q9Y6L6 691 aa11.6□□□□□ -0.55
PTCD1-201ENST00000292478 COL24A1Q17RW2 1714 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 A0A1W2PNR3 127 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 F6UZH7 168 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 NRG2O14511 850 aaPredicted RBP11.59□□□□□ -0.55
PTCD1-201ENST00000292478 SH2D1BO14796 132 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 JTBO76095 146 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 NRASP01111 189 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 PRKACAP17612 351 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 FGF9P31371 208 aaPredicted RBP11.59□□□□□ -0.55
PTCD1-201ENST00000292478 MMP15P51511 669 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 FAM122BQ7Z309 247 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 SRRQ9GZT4 340 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 PLK3Q9H4B4 646 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 TAF9BQ9HBM6 251 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 CTSFQ9UBX1 484 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 EXO1Q9UQ84 846 aaKnown RBP11.59□□□□□ -0.55
PTCD1-201ENST00000292478 HSD17B6O14756 317 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 LINC01565O15544 149 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 OR2J2O76002 312 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 MSRB3Q8IXL7 192 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 MENTQ9BUN1 341 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 SLC25A32Q9H2D1 315 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 TCEAL2Q9H3H9 227 aaPredicted RBP11.59□□□□□ -0.55
PTCD1-201ENST00000292478 EPXP11678 715 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 GABRB1P18505 474 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 DSCR4P56555 118 aaPredicted RBP11.59□□□□□ -0.55
PTCD1-201ENST00000292478 NAA40Q86UY6 237 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 ETFBKMTQ8IXQ9 262 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 SLC35G3Q8N808 338 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 DTWD2Q8NBA8 298 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 NIPSNAP3BQ9BS92 247 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 SLC17A5Q9NRA2 495 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 DHHO43323 396 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 TPOP07202 933 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 TGM4P49221 684 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 AQP6Q13520 282 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 C11orf91Q3C1V1 193 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 SPACA9Q96E40 222 aaPredicted RBP11.59□□□□□ -0.55
PTCD1-201ENST00000292478 DDOQ99489 341 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 CACFD1Q9UGQ2 172 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 PUS1Q9Y606 427 aaKnown RBP eCLIP11.59□□□□□ -0.55
PTCD1-201ENST00000292478 SCN9AQ15858 1988 aa11.59□□□□□ -0.55
PTCD1-201ENST00000292478 A0A0A6YYJ9 748 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 TUBAL3A6NHL2 446 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 SMLR1H3BR10 107 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 SIX6O95475 246 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 F10P00742 488 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 GUSBP08236 651 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 CT45A6P0DMU7 189 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 CT45A5P0DMU8 189 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 CT45A7P0DMV0 189 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 CT45A8P0DMV1 189 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 CT45A9P0DMV2 189 aa11.58□□□□□ -0.56
PTCD1-201ENST00000292478 ALOX5APP20292 161 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms