RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 AUNIPQ9H7T9 357 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 SLCO1C1Q9NYB5 712 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 NPIPA1Q9UND3 350 aa14.96□□□□□ -0.01
CPSF4-201ENST00000292476 ITPR1Q14643 2758 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 LOC400499M0QZD8 3231 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 PCNX3Q9H6A9 2034 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 A0A1B0GUH1 482 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 ANKRD20A5PA0PJZ0 165 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 FAM171A2A8MVW0 826 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 MS4A18H0YCH9 400 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 DCTN6O00399 190 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 MT-ND4P03905 459 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 PSMB1P20618 241 aaKnown RBP14.95□□□□□ -0.02
CPSF4-201ENST00000292476 IL11P20809 199 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 MS4A18Q3C1V0 323 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 SLC25A25Q6KCM7 469 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 OR6N2Q8NGY6 317 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 OTOSQ8NHW6 89 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 ZNF519Q8TB69 540 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 SYNPRQ8TBG9 265 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 MED30Q96HR3 178 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 RADILQ96JH8 1075 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 SRA1Q9HD15 236 aaKnown RBP14.95□□□□□ -0.02
CPSF4-201ENST00000292476 HRASLSQ9HDD0 168 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 VSX1Q9NZR4 365 aaPredicted RBP14.95□□□□□ -0.02
CPSF4-201ENST00000292476 MPDZO75970 2070 aa14.95□□□□□ -0.02
CPSF4-201ENST00000292476 LOC102725191A0A1B0GVB3 256 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 K7ENP7 123 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 GPR171O14626 319 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 NKX2-8O15522 239 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 SNAPC5O75971 98 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 RPP14O95059 124 aaKnown RBP14.94□□□□□ -0.02
CPSF4-201ENST00000292476 AKR7A3O95154 331 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 VAMP5O95183 116 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 SP1P08047 785 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 GDF1P27539 372 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 CRABP1P29762 137 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 CCR6P51684 374 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 TMEM69Q5SWH9 247 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 METTL11BQ5VVY1 283 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 TMEM225Q6GV28 225 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 INO80CQ6PI98 192 aaPredicted RBP14.94□□□□□ -0.02
CPSF4-201ENST00000292476 DNM1P34Q6PK57 102 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 PRSS45Q7RTY3 260 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 OR5M1Q8NGP8 315 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 OR52I2Q8NH67 350 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 DNAJA3Q96EY1 480 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 C4orf45Q96LM5 186 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 SIGLEC12Q96PQ1 595 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 TSPAN10Q9H1Z9 355 aaPredicted RBP14.94□□□□□ -0.02
CPSF4-201ENST00000292476 SCP2D1Q9UJQ7 156 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 ZNF222Q9UK12 451 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 IKZF2Q9UKS7 526 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 NBEAQ8NFP9 2946 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 MGAQ8IWI9 3026 aa14.94□□□□□ -0.02
CPSF4-201ENST00000292476 PRSS37A4D1T9 235 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 LRRC3CA6NJW4 275 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 SFTPDP35247 375 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 HTR2BP41595 481 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 MECP2P51608 486 aaKnown RBP14.93□□□□□ -0.02
CPSF4-201ENST00000292476 ARG2P78540 354 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 HSF1Q00613 529 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 C19orf57Q0VDD7 668 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 RNASE12Q5GAN4 147 aaKnown RBP14.93□□□□□ -0.02
CPSF4-201ENST00000292476 SEZ6L2Q6UXD5 910 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 UEVLDQ8IX04 471 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 ZNF676Q8N7Q3 588 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 TMEM178AQ8NBL3 297 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 ZNF431Q8TF32 576 aaPredicted RBP14.93□□□□□ -0.02
CPSF4-201ENST00000292476 MCHR2Q969V1 340 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 OXGR1Q96P68 337 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 OR8B4Q96RC9 309 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 TMEM185BQ9H7F4 350 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 SLC17A5Q9NRA2 495 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 DEPPQ9NTK1 212 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 RCE1Q9Y256 329 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 AQP7P3A6NL99 342 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 ANXA2P2A6NMY6 339 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 SMLR1H3BR10 107 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 PSMD9O00233 223 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 AKR7A2O43488 359 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 NME2P1O60361 137 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 TRAPPC6AO75865 159 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 ANXA2P07355 339 aaKnown RBP14.93□□□□□ -0.02
CPSF4-201ENST00000292476 ADRA2CP18825 462 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 NME2P22392 152 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 GPR85P60893 370 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 ROM1Q03395 351 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 FOXO1Q12778 655 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 PDSS1Q5T2R2 415 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 ATP1A1-AS1Q5TC04 95 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 SLC35D2Q76EJ3 337 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 DPY19L4Q7Z388 723 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 SULF2Q8IWU5 870 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 IZUMO1Q8IYV9 350 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 MDS2Q8NDY4 140 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 SNAPC3Q92966 411 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 SFXN2Q96NB2 322 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 SLX1AQ9BQ83 275 aa14.93□□□□□ -0.02
CPSF4-201ENST00000292476 SYT4Q9H2B2 425 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms