RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 ARID1AO14497 2285 aa23.13■■□□□ 1.29
SSU72-201ENST00000291386 USF3Q68DE3 2245 aa23.13■■□□□ 1.29
SSU72-201ENST00000291386 CREBBPQ92793 2442 aa23.12■■□□□ 1.29
SSU72-201ENST00000291386 M0R129 80 aa23.12■■□□□ 1.29
SSU72-201ENST00000291386 ABHD16AO95870 558 aa23.12■■□□□ 1.29
SSU72-201ENST00000291386 LCKP06239 509 aa23.12■■□□□ 1.29
SSU72-201ENST00000291386 CDKN1AP38936 164 aa23.12■■□□□ 1.29
SSU72-201ENST00000291386 RGS6P49758 472 aa23.12■■□□□ 1.29
SSU72-201ENST00000291386 RPS7P62081 194 aaKnown RBP23.12■■□□□ 1.29
SSU72-201ENST00000291386 SNRPD2P62316 118 aaKnown RBP23.12■■□□□ 1.29
SSU72-201ENST00000291386 MEPCEQ7L2J0 689 aaKnown RBP23.12■■□□□ 1.29
SSU72-201ENST00000291386 DPY19L4Q7Z388 723 aa23.12■■□□□ 1.29
SSU72-201ENST00000291386 PACRGLQ8N7B6 248 aa23.12■■□□□ 1.29
SSU72-201ENST00000291386 OR6N2Q8NGY6 317 aa23.12■■□□□ 1.29
SSU72-201ENST00000291386 IL4I1Q96RQ9 567 aa23.12■■□□□ 1.29
SSU72-201ENST00000291386 CACNG6Q9BXT2 260 aa23.12■■□□□ 1.29
SSU72-201ENST00000291386 H2AFY2Q9P0M6 372 aaPredicted RBP23.12■■□□□ 1.29
SSU72-201ENST00000291386 IGLV3-9A0A075B6K5 115 aa23.11■■□□□ 1.29
SSU72-201ENST00000291386 H3BSA7 217 aa23.11■■□□□ 1.29
SSU72-201ENST00000291386 NGFP01138 241 aa23.11■■□□□ 1.29
SSU72-201ENST00000291386 DBHP09172 617 aa23.11■■□□□ 1.29
SSU72-201ENST00000291386 ERVS71-1P61550 626 aa23.11■■□□□ 1.29
SSU72-201ENST00000291386 GGTLC2Q14390 218 aa23.11■■□□□ 1.29
SSU72-201ENST00000291386 TMEM154Q6P9G4 183 aa23.11■■□□□ 1.29
SSU72-201ENST00000291386 RFPL4BQ6ZWI9 263 aa23.11■■□□□ 1.29
SSU72-201ENST00000291386 RHOUQ7L0Q8 258 aa23.11■■□□□ 1.29
SSU72-201ENST00000291386 GID4Q8IVV7 300 aa23.11■■□□□ 1.29
SSU72-201ENST00000291386 SLAMF6Q96DU3 332 aa23.11■■□□□ 1.29
SSU72-201ENST00000291386 MARS2Q96GW9 593 aaKnown RBP23.11■■□□□ 1.29
SSU72-201ENST00000291386 COG8Q96MW5 612 aa23.11■■□□□ 1.29
SSU72-201ENST00000291386 OR51B6Q9H340 312 aa23.11■■□□□ 1.29
SSU72-201ENST00000291386 AKAP9Q99996 3911 aa23.1■■□□□ 1.29
SSU72-201ENST00000291386 SLC22A31A6NKX4 558 aa23.1■■□□□ 1.29
SSU72-201ENST00000291386 OTX1P32242 354 aaPredicted RBP23.1■■□□□ 1.29
SSU72-201ENST00000291386 PPOXP50336 477 aa23.1■■□□□ 1.29
SSU72-201ENST00000291386 LPCAT4Q643R3 524 aa23.1■■□□□ 1.29
SSU72-201ENST00000291386 PRSS57Q6UWY2 283 aa23.1■■□□□ 1.29
SSU72-201ENST00000291386 BCDIN3DQ7Z5W3 292 aaKnown RBP23.1■■□□□ 1.29
SSU72-201ENST00000291386 ZNF454Q8N9F8 522 aa23.1■■□□□ 1.29
SSU72-201ENST00000291386 OTOSQ8NHW6 89 aa23.1■■□□□ 1.29
SSU72-201ENST00000291386 ABHD4Q8TB40 342 aa23.1■■□□□ 1.29
SSU72-201ENST00000291386 SMPD3Q9NY59 655 aaPredicted RBP23.1■■□□□ 1.29
SSU72-201ENST00000291386 HAO2Q9NYQ3 351 aa23.1■■□□□ 1.29
SSU72-201ENST00000291386 GRIP1Q9Y3R0 1128 aa23.1■■□□□ 1.29
SSU72-201ENST00000291386 DLGAP1O14490 977 aa23.09■■□□□ 1.29
SSU72-201ENST00000291386 SELENOFO60613 162 aa23.09■■□□□ 1.29
SSU72-201ENST00000291386 NUDT6P53370 316 aa23.09■■□□□ 1.29
SSU72-201ENST00000291386 PPP1CBP62140 327 aa23.09■■□□□ 1.29
SSU72-201ENST00000291386 EIF2B1Q14232 305 aaKnown RBP23.09■■□□□ 1.29
SSU72-201ENST00000291386 ZNF718Q3SXZ3 478 aa23.09■■□□□ 1.29
SSU72-201ENST00000291386 SLC25A30Q5SVS4 291 aa23.09■■□□□ 1.29
SSU72-201ENST00000291386 OGFRL1Q5TC84 451 aaPredicted RBP23.09■■□□□ 1.29
SSU72-201ENST00000291386 SHEQ5VZ18 495 aa23.09■■□□□ 1.29
SSU72-201ENST00000291386 MBNL2Q5VZF2 373 aaKnown RBP23.09■■□□□ 1.29
SSU72-201ENST00000291386 COLCA1Q6ZS62 124 aa23.09■■□□□ 1.29
SSU72-201ENST00000291386 SLC16A9Q7RTY1 509 aa23.09■■□□□ 1.29
SSU72-201ENST00000291386 LRP11Q86VZ4 500 aa23.09■■□□□ 1.29
SSU72-201ENST00000291386 FAM81AQ8TBF8 368 aa23.09■■□□□ 1.29
SSU72-201ENST00000291386 SYNPRQ8TBG9 265 aa23.09■■□□□ 1.29
SSU72-201ENST00000291386 PERPQ96FX8 193 aa23.09■■□□□ 1.29
SSU72-201ENST00000291386 ABHD6Q9BV23 337 aa23.09■■□□□ 1.29
SSU72-201ENST00000291386 YIPF3Q9GZM5 350 aa23.09■■□□□ 1.29
SSU72-201ENST00000291386 ZNF878C9JN71 531 aa23.08■■□□□ 1.29
SSU72-201ENST00000291386 SLC16A6O15403 523 aa23.08■■□□□ 1.29
SSU72-201ENST00000291386 ACSM4P0C7M7 580 aa23.08■■□□□ 1.29
SSU72-201ENST00000291386 PEX2P28328 305 aa23.08■■□□□ 1.29
SSU72-201ENST00000291386 ATP5J2P56134 94 aa23.08■■□□□ 1.29
SSU72-201ENST00000291386 SELENOVP59797 346 aa23.08■■□□□ 1.29
SSU72-201ENST00000291386 SNRPGP62308 76 aaKnown RBP23.08■■□□□ 1.29
SSU72-201ENST00000291386 SPNS3Q6ZMD2 512 aa23.08■■□□□ 1.29
SSU72-201ENST00000291386 SLC25A40Q8TBP6 338 aa23.08■■□□□ 1.29
SSU72-201ENST00000291386 RNF133Q8WVZ7 376 aa23.08■■□□□ 1.29
SSU72-201ENST00000291386 SPTSSAQ969W0 71 aa23.08■■□□□ 1.29
SSU72-201ENST00000291386 APOBEC3DQ96AK3 386 aaPredicted RBP23.08■■□□□ 1.29
SSU72-201ENST00000291386 C1QTNF5Q9BXJ0 243 aa23.08■■□□□ 1.29
SSU72-201ENST00000291386 FAM118AQ9NWS6 357 aa23.08■■□□□ 1.29
SSU72-201ENST00000291386 IMPAD1Q9NX62 359 aa23.08■■□□□ 1.29
SSU72-201ENST00000291386 GMPPBQ9Y5P6 360 aa23.08■■□□□ 1.29
SSU72-201ENST00000291386 OTOGQ6ZRI0 2925 aa23.08■■□□□ 1.28
SSU72-201ENST00000291386 TPTEP56180 551 aa23.07■■□□□ 1.28
SSU72-201ENST00000291386 KLF3P57682 345 aaPredicted RBP23.07■■□□□ 1.28
SSU72-201ENST00000291386 TMED1Q13445 227 aa23.07■■□□□ 1.28
SSU72-201ENST00000291386 LRRC36Q1X8D7 754 aa23.07■■□□□ 1.28
SSU72-201ENST00000291386 KRTAP1-3Q8IUG1 177 aa23.07■■□□□ 1.28
SSU72-201ENST00000291386 SYT3Q9BQG1 590 aa23.07■■□□□ 1.28
SSU72-201ENST00000291386 OR2J1Q9GZK6 312 aa23.07■■□□□ 1.28
SSU72-201ENST00000291386 MYEF2Q9P2K5 600 aaKnown RBP23.07■■□□□ 1.28
SSU72-201ENST00000291386 WARS2Q9UGM6 360 aaKnown RBP23.07■■□□□ 1.28
SSU72-201ENST00000291386 DUSP13Q9UII6 198 aa23.07■■□□□ 1.28
SSU72-201ENST00000291386 FZR1Q9UM11 496 aa23.07■■□□□ 1.28
SSU72-201ENST00000291386 STARD10Q9Y365 291 aa23.07■■□□□ 1.28
SSU72-201ENST00000291386 LOC100130705A0A1B0GUX0 176 aa23.06■■□□□ 1.28
SSU72-201ENST00000291386 F5H5K5 113 aa23.06■■□□□ 1.28
SSU72-201ENST00000291386 IGHV3-13P01766 116 aa23.06■■□□□ 1.28
SSU72-201ENST00000291386 LYNP07948 512 aa23.06■■□□□ 1.28
SSU72-201ENST00000291386 ALOX5APP20292 161 aa23.06■■□□□ 1.28
SSU72-201ENST00000291386 HTR1FP30939 366 aa23.06■■□□□ 1.28
SSU72-201ENST00000291386 NAA10P41227 235 aaPredicted RBP23.06■■□□□ 1.28
SSU72-201ENST00000291386 GRB2P62993 217 aaKnown RBP23.06■■□□□ 1.28
SSU72-201ENST00000291386 OR5L1Q8NGL2 311 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms