RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 HOXA1P49639 335 aaPredicted RBP10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 B4GALNT1Q00973 533 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 TGFBR3Q03167 851 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 TLE3Q04726 772 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 GLO1Q04760 184 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 COTL1Q14019 142 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 Q3ZCU0 254 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 SFRP5Q5T4F7 317 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 UQCC3Q6UW78 93 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 SLC35D2Q76EJ3 337 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 OR9K2Q8NGE7 335 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 SFT2D1Q8WV19 159 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 RHOFQ9HBH0 211 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 MSTNO14793 375 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 SLC2A10O95528 541 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 CRYABP02511 175 aaKnown RBP10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 CD53P19397 219 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 ARL3P36405 182 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 SLC6A12P48065 614 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 NPY4RP50391 375 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 TLE4Q04727 773 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 IL10RAQ13651 578 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 TUSC1Q2TAM9 212 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 FAM209BQ5JX69 171 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 GLYATL3Q5SZD4 288 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 OR2T2Q6IF00 324 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 TCTN3Q6NUS6 607 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 DPY19L4Q7Z388 723 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 UEVLDQ8IX04 471 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 PPP1R1CQ8WVI7 109 aa10.34□□□□□ -0.75
NPC1L1-201ENST00000289547 SULT2B1O00204 365 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 GPR31O00270 319 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 BCL2L11O43521 198 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 HCRTR1O43613 425 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 F13BP05160 661 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF43P17038 809 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 SLC25A35Q3KQZ1 300 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 CST9LP1Q5W188 147 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 GDF7Q7Z4P5 450 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 OR1N1Q8NGS0 311 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 OR2A1Q8NGT9 310 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 NT5CQ8TCD5 201 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 OR5B2Q96R09 309 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 VDAC3Q9Y277 283 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 PIGBOS1A0A0B4J2F0 54 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 FTCDNL1E5RQL4 147 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 C1QAP02745 245 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 MT-ND4LP03901 98 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 SSPNQ14714 243 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 NKAIN4Q8IVV8 208 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 CMTM1Q8IZ96 169 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 PLPP7Q8NBV4 271 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 LFNGQ8NES3 379 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 NINJ1Q92982 152 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 SENP5Q96HI0 755 aaPredicted RBP10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 SGCZQ96LD1 299 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 BTBD17A6NE02 478 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 PPP5D1E7EU14 171 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 LY86O95711 162 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 PMP2P02689 132 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 OR4E1P0C645 316 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 GABRR1P24046 479 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 CRABP1P29762 137 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 RFX2P48378 723 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 RAB11AP62491 216 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 C17orf67Q0P5P2 114 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 ALKBH1Q13686 389 aaKnown RBP10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 BVESQ8NE79 360 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 CHTF18Q8WVB6 975 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 SDSLQ96GA7 329 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 AKR1E2Q96JD6 320 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 OPA3Q9H6K4 179 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 MBD1Q9UIS9 605 aaPredicted RBP10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 EMC9Q9Y3B6 208 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF337Q9Y3M9 751 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 ZSWIM8A7E2V4 1837 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 LOC100289279A0A1B0GTE1 492 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF724A8MTY0 619 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 C21orf140B9A014 251 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 AQP8O94778 261 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 LPLP06858 475 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 RAB1AP62820 205 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 SNRPNP63162 240 aaKnown RBP10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 BAGE3Q86Y29 109 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 BAGE2Q86Y30 109 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 GABRG1Q8N1C3 465 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 CA5BP1Q8WTZ4 195 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 NPAS1Q99742 590 aa10.33□□□□□ -0.76
NPC1L1-201ENST00000289547 PYCARD-AS1I3L0S3 204 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 CXCL3P19876 107 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 MSX1P28360 303 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 LAP3P28838 519 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 SFTPDP35247 375 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 MMP15P51511 669 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 TAS2R46P59540 309 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 GLDNQ6ZMI3 551 aaPredicted RBP10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 OR2W3Q7Z3T1 314 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 CBLN2Q8IUK8 224 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 FAM185AQ8N0U4 392 aa10.32□□□□□ -0.76
NPC1L1-201ENST00000289547 ZNF439Q8NDP4 499 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms