RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 ZNF878C9JN71 531 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 H7C1Q1 480 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 M0R135 149 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 OVOL3O00110 214 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 TBX1O43435 398 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 SPRY3O43610 288 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 CLPTM1O96005 669 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 ALPLP05186 524 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 ANXA2P07355 339 aaKnown RBP5.61□□□□□ -1.51
CD44-204ENST00000279452 LYNP07948 512 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 H2BFMP0C1H6 154 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 PSKH1P11801 424 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 CD99P14209 185 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 ANPEPP15144 967 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 EPHA2P29317 976 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 GGT2P36268 569 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 ATP6V1E1P36543 226 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 POLR2IP36954 125 aaKnown RBP5.61□□□□□ -1.51
CD44-204ENST00000279452 MPV17P39210 176 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 SLC15A1P46059 708 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 RGS6P49758 472 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 PRKXP51817 358 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 EFNA4P52798 201 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 TPTEP56180 551 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 PRSS12P56730 875 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 ECH1Q13011 328 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 MALLQ13021 153 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 MOGQ16653 247 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 TSTQ16762 297 aaKnown RBP5.61□□□□□ -1.51
CD44-204ENST00000279452 MSMPQ1L6U9 139 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 SWI5Q1ZZU3 235 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 MST1LQ2TV78 715 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 GFOD2Q3B7J2 385 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 FREM1Q5H8C1 2179 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 SLC35D3Q5M8T2 416 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 C12orf73Q69YU5 71 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 ZNF771Q7L3S4 317 aaPredicted RBP5.61□□□□□ -1.51
CD44-204ENST00000279452 SHFQ7M4L6 423 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 MRPL21Q7Z2W9 205 aaKnown RBP5.61□□□□□ -1.51
CD44-204ENST00000279452 TGIF2LYQ8IUE0 185 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.61□□□□□ -1.51
CD44-204ENST00000279452 GID4Q8IVV7 300 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 OR5AS1Q8N127 324 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 GALNT4Q8N4A0 578 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 BHLHE23Q8NDY6 225 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 OR5L1Q8NGL2 311 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 TMEM163Q8TC26 289 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 KLF14Q8TD94 323 aaPredicted RBP5.61□□□□□ -1.51
CD44-204ENST00000279452 IGFBPL1Q8WX77 278 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 PTP4A1Q93096 173 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 APOBEC3DQ96AK3 386 aaPredicted RBP5.61□□□□□ -1.51
CD44-204ENST00000279452 ZNF799Q96GE5 643 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 COG8Q96MW5 612 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 DCLRE1CQ96SD1 692 aaKnown RBP5.61□□□□□ -1.51
CD44-204ENST00000279452 CNN2Q99439 309 aaKnown RBP5.61□□□□□ -1.51
CD44-204ENST00000279452 DDOQ99489 341 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 RHNO1Q9BSD3 238 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 GABARAPL3Q9BY60 117 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 MS4A5Q9H3V2 200 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 TOR3AQ9H497 397 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 BRD7Q9NPI1 651 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 USE1Q9NZ43 259 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 UNC79Q9P2D8 2635 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 ATPIF1Q9UII2 106 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 LAMP5Q9UJQ1 280 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 GTF2A1LQ9UNN4 478 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 GMPPBQ9Y5P6 360 aa5.61□□□□□ -1.51
CD44-204ENST00000279452 FLNBO75369 2602 aaKnown RBP5.61□□□□□ -1.51
CD44-204ENST00000279452 PKDREJQ9NTG1 2253 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 SLC22A31A6NKX4 558 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 RNF223E7ERA6 249 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 PSMD9O00233 223 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 APOL3O95236 402 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 F12P00748 615 aaPredicted RBP5.6□□□□□ -1.51
CD44-204ENST00000279452 ACSM4P0C7M7 580 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 SLC2A1P11166 492 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 DAOP14920 347 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 CX3CR1P49238 355 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 EVX1P49640 407 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 PDLIM4P50479 330 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 ZNF81P51508 661 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 GRB2P62993 217 aaKnown RBP5.6□□□□□ -1.51
CD44-204ENST00000279452 HIST1H3AP68431 136 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 HLXQ14774 488 aaPredicted RBP5.6□□□□□ -1.51
CD44-204ENST00000279452 TESK1Q15569 626 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 ZMAT1Q5H9K5 638 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 HIST2H3PS2Q5TEC6 136 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 LINC01590Q5TEZ4 76 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 NXNL2Q5VZ03 156 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 LPCAT4Q643R3 524 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 SPNS3Q6ZMD2 512 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 HIST2H3AQ71DI3 136 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 MEPCEQ7L2J0 689 aaKnown RBP5.6□□□□□ -1.51
CD44-204ENST00000279452 KRT77Q7Z794 578 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 COMMD2Q86X83 199 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 C1orf174Q8IYL3 243 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 ZNF454Q8N9F8 522 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 ZNF555Q8NEP9 628 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 OR51G2Q8NGK0 314 aa5.6□□□□□ -1.51
CD44-204ENST00000279452 NEU4Q8WWR8 484 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms