RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 NEK6Q9HC98 313 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 SLC5A6Q9Y289 635 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 COL27A1Q8IZC6 1860 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-201ENST00000279247 A0A087WZY1 265 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 SMLR1H3BR10 107 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 SYT7O43581 403 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 AQP8O94778 261 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 IGHV3-9P01782 118 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 BTCP35070 178 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 SLC6A9P48067 706 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 RAB11BQ15907 218 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 C2orf76Q3KRA6 126 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 FAM3DQ96BQ1 224 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 ST6GAL2Q96JF0 529 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 ZPBPQ9BS86 351 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 PBOV1Q9GZY1 135 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 GLTPQ9NZD2 209 aa15.9■□□□□ 0.14
CAPN1-201ENST00000279247 FAM166BA8MTA8 275 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 F5H5K5 113 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 TTRP02766 147 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 ARSBP15848 533 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 SLC6A1P30531 599 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 CD96P40200 585 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 GUCA2AQ02747 115 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 FDX2Q6P4F2 183 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 CREB3L2Q70SY1 520 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 ABHD12BQ7Z5M8 362 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-201ENST00000279247 ZNF283Q8N7M2 679 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 DUSP18Q8NEJ0 188 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 OR9K2Q8NGE7 335 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 FAM46BQ96A09 425 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 RNF170Q96K19 258 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 DDA1Q9BW61 102 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 SPENQ96T58 3664 aaKnown RBP15.89■□□□□ 0.13
CAPN1-201ENST00000279247 GMDSO60547 372 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 PTH2RP49190 550 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 SUCLG1P53597 346 aaKnown RBP15.89■□□□□ 0.13
CAPN1-201ENST00000279247 TAS2R20P59543 309 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 RAC1P63000 192 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 MRPS15P82914 257 aaKnown RBP15.89■□□□□ 0.13
CAPN1-201ENST00000279247 ZFP69Q49AA0 526 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 TMEM255AQ5JRV8 349 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 ABHD17BQ5VST6 288 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 OR13C9Q8NGT0 318 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 SMIM4Q8WVI0 70 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 ITPKCQ96DU7 683 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 LIN37Q96GY3 246 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-201ENST00000279247 ATG5Q9H1Y0 275 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 MGAQ8IWI9 3026 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 TRAV18A0A075B6X5 111 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 NPIPB13A6NJU9 1138 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 LRRC3CA6NJW4 275 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 NPIPB4C9JG80 1138 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 PMS2P2O95744 297 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 CELA3AP09093 270 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 PRSS12P56730 875 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 CARD18P57730 90 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 SLC25A47Q6Q0C1 308 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 FAM57BQ71RH2 274 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 HAVCR1Q96D42 359 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 ZNF845Q96IR2 970 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-201ENST00000279247 FLVCR2Q9UPI3 526 aa15.89■□□□□ 0.13
CAPN1-201ENST00000279247 HSPB2A8KAH6 182 aa15.88■□□□□ 0.13
CAPN1-201ENST00000279247 SRSF10O75494 262 aaKnown RBP15.88■□□□□ 0.13
CAPN1-201ENST00000279247 DCTDP32321 178 aa15.88■□□□□ 0.13
CAPN1-201ENST00000279247 CSNK2A1P68400 391 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-201ENST00000279247 HSPB2Q16082 182 aa15.88■□□□□ 0.13
CAPN1-201ENST00000279247 ZNF627Q7L945 461 aa15.88■□□□□ 0.13
CAPN1-201ENST00000279247 ALKBH3Q96Q83 286 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-201ENST00000279247 MFRPQ9BY79 579 aa15.88■□□□□ 0.13
CAPN1-201ENST00000279247 DMXL2Q8TDJ6 3036 aa15.88■□□□□ 0.13
CAPN1-201ENST00000279247 C5orf63A6NC05 138 aa15.88■□□□□ 0.13
CAPN1-201ENST00000279247 HMX3A6NHT5 357 aa15.88■□□□□ 0.13
CAPN1-201ENST00000279247 HRGP04196 525 aa15.88■□□□□ 0.13
CAPN1-201ENST00000279247 CALCBP10092 127 aa15.88■□□□□ 0.13
CAPN1-201ENST00000279247 ABOP16442 354 aa15.88■□□□□ 0.13
CAPN1-201ENST00000279247 ZNF121P58317 390 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-201ENST00000279247 H3F3AP84243 136 aa15.88■□□□□ 0.13
CAPN1-201ENST00000279247 BIVMQ86UB2 503 aa15.88■□□□□ 0.13
CAPN1-201ENST00000279247 FCAMRQ8WWV6 532 aa15.88■□□□□ 0.13
CAPN1-201ENST00000279247 ADAT3Q96EY9 351 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-201ENST00000279247 DPAGT1Q9H3H5 408 aa15.88■□□□□ 0.13
CAPN1-201ENST00000279247 FAM206AQ9NX38 181 aa15.88■□□□□ 0.13
CAPN1-201ENST00000279247 ZNF319Q9P2F9 582 aa15.88■□□□□ 0.13
CAPN1-201ENST00000279247 OR5H15A6NDH6 313 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 KRT33AO76009 404 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 PATE4P0C8F1 98 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 POU3F2P20265 443 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-201ENST00000279247 PCK2Q16822 640 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 PLA1AQ53H76 456 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 ZNF704Q6ZNC4 412 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-201ENST00000279247 OR2M2Q96R28 347 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 MARVELD1Q9BSK0 173 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 ULBP2Q9BZM5 246 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 SPRY4Q9C004 299 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 ZNF878C9JN71 531 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 SMAD9O15198 467 aaKnown RBP15.87■□□□□ 0.13
CAPN1-201ENST00000279247 TCRBP04435 133 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 DCAF10Q5QP82 559 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 GLT8D1Q68CQ7 371 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms