RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 NUFIP1Q9UHK0 495 aaKnown RBP8.48□□□□□ -1.05
TRIM55-201ENST00000276573 CDV3Q9UKY7 258 aaKnown RBP8.48□□□□□ -1.05
TRIM55-201ENST00000276573 FLVCR1Q9Y5Y0 555 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 CACNG2Q9Y698 323 aa8.48□□□□□ -1.05
TRIM55-201ENST00000276573 A0A1B0GTI1 187 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 HMX3A6NHT5 357 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 PRR33A8MZF0 331 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 TPPPO94811 219 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 HPNP05981 417 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 ITGA5P08648 1049 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 MSR1P21757 451 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 CDK2P24941 298 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 SLC6A1P30531 599 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 NTF4P34130 210 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 DDOSTP39656 456 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 MNDAP41218 407 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 PTH2RP49190 550 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 EIF2B2P49770 351 aaKnown RBP8.47□□□□□ -1.05
TRIM55-201ENST00000276573 PRKXP51817 358 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 PLA2G7Q13093 441 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 ENDOGQ14249 297 aaKnown RBP8.47□□□□□ -1.05
TRIM55-201ENST00000276573 RAB11BQ15907 218 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 RNASE12Q5GAN4 147 aaKnown RBP8.47□□□□□ -1.05
TRIM55-201ENST00000276573 LINGO2Q7L985 606 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 KRT74Q7RTS7 529 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 TOMM5Q8N4H5 51 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 CLEC1AQ8NC01 280 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 OR10D3Q8NH80 312 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 SMIM4Q8WVI0 70 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 SLC25A28Q96A46 364 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 NABP1Q96AH0 204 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 RBM24Q9BX46 236 aaKnown RBP8.47□□□□□ -1.05
TRIM55-201ENST00000276573 HES7Q9BYE0 225 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 PLEKHA1Q9HB21 404 aa8.47□□□□□ -1.05
TRIM55-201ENST00000276573 A0A0B4J293 547 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 CDRT15L2A8MXV6 281 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 GABARAPH6UMI1 98 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 CDK2AP1O14519 115 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 SYT7O43581 403 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 ORC5O43913 435 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 CCNKO75909 580 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 ZNF84P51523 738 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 PSMA6P60900 246 aaKnown RBP8.46□□□□□ -1.05
TRIM55-201ENST00000276573 HIST1H3AP68431 136 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 TGIF1Q15583 401 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 PLA1AQ53H76 456 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 PDSS1Q5T2R2 415 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 HIST2H3PS2Q5TEC6 136 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 HIST2H3AQ71DI3 136 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 LUZP2Q86TE4 346 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 SIAH3Q8IW03 269 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 PLPP7Q8NBV4 271 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 GJC3Q8NFK1 279 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 FAM3DQ96BQ1 224 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 ULBP2Q9BZM5 246 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 MOB1AQ9H8S9 216 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 B4GALT7Q9UBV7 327 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 RCE1Q9Y256 329 aa8.46□□□□□ -1.05
TRIM55-201ENST00000276573 LOC100289279A0A1B0GTE1 492 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 DCDC2BA2VCK2 349 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 CENPXA8MT69 81 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 XRCC3O43542 346 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 KRT33AO76009 404 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 GLSO94925 669 aaPredicted RBP8.46□□□□□ -1.06
TRIM55-201ENST00000276573 SP1P08047 785 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 TMIGD3P0DMS9 266 aaPredicted RBP8.46□□□□□ -1.06
TRIM55-201ENST00000276573 HLA-DMAP28067 261 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 BTCP35070 178 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 RFC3P40938 356 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 POU3F4P49335 361 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 EFNB2P52799 333 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF121P58317 390 aaPredicted RBP8.46□□□□□ -1.06
TRIM55-201ENST00000276573 GRB2P62993 217 aaKnown RBP8.46□□□□□ -1.06
TRIM55-201ENST00000276573 MRPS34P82930 218 aaKnown RBP8.46□□□□□ -1.06
TRIM55-201ENST00000276573 SPOCK1Q08629 439 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 TCF15Q12870 199 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 DYRK1AQ13627 763 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 KLF9Q13886 244 aaPredicted RBP8.46□□□□□ -1.06
TRIM55-201ENST00000276573 C1orf100Q5SVJ3 147 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 TMEM69Q5SWH9 247 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 FAM27BQ5VT28 67 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 ABLIM2Q6H8Q1 611 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 SLC25A25Q6KCM7 469 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 MTFR2Q6P444 385 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 ANKRD16Q6P6B7 361 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 AAED1Q7RTV5 226 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 LYPD6Q86Y78 171 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 GALNT16Q8N428 558 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 OR51A2Q8NGJ7 313 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 OR1J2Q8NGS2 313 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 OR52I2Q8NH67 350 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 OR51E1Q8TCB6 317 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 C15orf40Q8WUR7 153 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 FCAMRQ8WWV6 532 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 CPNE4Q96A23 557 aaPredicted RBP8.46□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF837Q96EG3 531 aaPredicted RBP8.46□□□□□ -1.06
TRIM55-201ENST00000276573 C7orf50Q9BRJ6 194 aaKnown RBP8.46□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF703Q9H7S9 590 aaPredicted RBP8.46□□□□□ -1.06
TRIM55-201ENST00000276573 SLC17A5Q9NRA2 495 aa8.46□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF319Q9P2F9 582 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms