RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 RNF122Q9H9V4 155 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 ADAP2Q9NPF8 381 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 ZNF629Q9UEG4 869 aaPredicted RBP9.27□□□□□ -0.93
UPF3B-201ENST00000276201 HIF3AQ9Y2N7 669 aa9.27□□□□□ -0.93
UPF3B-201ENST00000276201 SCN2AQ99250 2005 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 SCN3AQ9NY46 2000 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 DSPP15924 2871 aaKnown RBP9.26□□□□□ -0.93
UPF3B-201ENST00000276201 TRAV8-7A0A075B6U6 113 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 PCP4L1A6NKN8 68 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 IDSB3KWA1 339 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 RAB3DO95716 219 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 CD3DP04234 171 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 ST6GAL1P15907 406 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 FSTP19883 344 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 PVALBP20472 110 aaPredicted RBP9.26□□□□□ -0.93
UPF3B-201ENST00000276201 CD34P28906 385 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 GABRA3P34903 492 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 ADH7P40394 386 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 CASRP41180 1078 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 EMDP50402 254 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 LUMP51884 338 aaPredicted RBP9.26□□□□□ -0.93
UPF3B-201ENST00000276201 HSD11B2P80365 405 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 CLN3Q13286 438 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 KIR2DS3Q14952 304 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 ATPAF1Q5TC12 328 aaPredicted RBP9.26□□□□□ -0.93
UPF3B-201ENST00000276201 TMEM164Q5U3C3 297 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 ABHD13Q7L211 337 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.26□□□□□ -0.93
UPF3B-201ENST00000276201 SLC25A42Q86VD7 318 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 GLYATL2Q8WU03 294 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 KCNE4Q8WWG9 221 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 ARL11Q969Q4 196 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 SLC25A28Q96A46 364 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 SEH1LQ96EE3 360 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 ADAD1Q96M93 576 aaKnown RBP9.26□□□□□ -0.93
UPF3B-201ENST00000276201 OR2A5Q96R48 311 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 OR6C1Q96RD1 312 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 ZFP57Q9NU63 452 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 SOHLH2Q9NX45 425 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 PCDHB10Q9UN67 800 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 SPACA6W5XKT8 324 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 CACNA1BQ00975 2339 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 TRAV18A0A075B6X5 111 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 NPIPA5A0A0B4J1W7 369 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 NPIPA7E9PJI5 369 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 SLC25A12O75746 678 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 CD14P08571 375 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 NPIPA8P0DM63 369 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 OR8G3PP0DMU2 310 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 ZBTB25P24278 435 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 RPL4P36578 427 aaKnown RBP9.26□□□□□ -0.93
UPF3B-201ENST00000276201 PPICP45877 212 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 POU3F4P49335 361 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 ARL4DP49703 201 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 PLA2G7Q13093 441 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 INPP5JQ15735 1006 aaPredicted RBP9.26□□□□□ -0.93
UPF3B-201ENST00000276201 ELP2Q6IA86 826 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 FBXO42Q6P3S6 717 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 FIGNL1Q6PIW4 674 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 KIRREL2Q6UWL6 708 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 LYG2Q86SG7 212 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 SPACA3Q8IXA5 215 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 OR51L1Q8NGJ5 315 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 OR1S2Q8NGQ3 325 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 OR6K6Q8NGW6 343 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 FAM3DQ96BQ1 224 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 C4orf45Q96LM5 186 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 WDR76Q9H967 626 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 MMP26Q9NRE1 261 aa9.26□□□□□ -0.93
UPF3B-201ENST00000276201 A0A0J9YY10 115 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 TEX13DA0A0J9YY54 714 aaPredicted RBP9.25□□□□□ -0.93
UPF3B-201ENST00000276201 CYR61O00622 381 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 EIF1AYO14602 144 aaKnown RBP9.25□□□□□ -0.93
UPF3B-201ENST00000276201 LDLRAD4O15165 306 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 RRP8O43159 456 aaKnown RBP9.25□□□□□ -0.93
UPF3B-201ENST00000276201 FGF5P12034 268 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 CD82P27701 267 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 TACR3P29371 465 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 BDKRB2P30411 391 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 DLSTP36957 453 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 EIF1AXP47813 144 aaKnown RBP9.25□□□□□ -0.93
UPF3B-201ENST00000276201 DHRS2Q13268 280 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 IL11RAQ14626 422 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 TGIF1Q15583 401 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 C2orf76Q3KRA6 126 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 AVPI1Q5T686 147 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 BIVMQ86UB2 503 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 C7orf57Q8NEG2 295 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 MITD1Q8WV92 249 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 PTCHD1Q96NR3 888 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 ZPBPQ9BS86 351 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 SPRY4Q9C004 299 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 EGLN1Q9GZT9 426 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 PILRAQ9UKJ1 303 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 KLHDC2Q9Y2U9 406 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 ADAM18Q9Y3Q7 739 aa9.25□□□□□ -0.93
UPF3B-201ENST00000276201 TMEM72A0PK05 275 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 S100A8P05109 93 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 SMIM6P0DI80 62 aa9.24□□□□□ -0.93
UPF3B-201ENST00000276201 LIPCP11150 499 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms