RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 FAM27D1Q5T7N8 215 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 LHX8Q68G74 356 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 Q6ZNB5 142 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 THNSL2Q86YJ6 484 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 ANKRD53Q8N9V6 530 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 SIGLEC11Q96RL6 698 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 GINS3Q9BRX5 216 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 CSAG2Q9Y5P2 127 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 FLVCR1Q9Y5Y0 555 aa10.42□□□□□ -0.74
USP53-201ENST00000274030 CPEP16870 476 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 PCK2Q16822 640 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 SPANXN5Q5MJ07 72 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 ZNF75AQ96N20 296 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 EGLN1Q9GZT9 426 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 RIMS4Q9H426 269 aaPredicted RBP10.41□□□□□ -0.74
USP53-201ENST00000274030 EXOSC3Q9NQT5 275 aaKnown RBP10.41□□□□□ -0.74
USP53-201ENST00000274030 MRPL22Q9NWU5 206 aaKnown RBP10.41□□□□□ -0.74
USP53-201ENST00000274030 PCYT1BQ9Y5K3 369 aaPredicted RBP10.41□□□□□ -0.74
USP53-201ENST00000274030 PRSS37A4D1T9 235 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 DVL1O14640 695 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 NME2P1O60361 137 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 VAMP5O95183 116 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 LAP3P28838 519 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 CDAP32320 146 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 DVL1P1P54792 670 aaPredicted RBP10.41□□□□□ -0.74
USP53-201ENST00000274030 LAIR1Q6GTX8 287 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 FAM199XQ6PEV8 388 aaPredicted RBP10.41□□□□□ -0.74
USP53-201ENST00000274030 KIRREL2Q6UWL6 708 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 TFAP2EQ6VUC0 442 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 BAGE3Q86Y29 109 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 BAGE2Q86Y30 109 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 ZCCHC4Q9H5U6 513 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 XRCC3O43542 346 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 NRASP01111 189 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 GLB1P16278 677 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 NDUFA6P56556 154 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 INSM1Q01101 510 aaPredicted RBP10.41□□□□□ -0.74
USP53-201ENST00000274030 TLE1Q04724 770 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 SELENBP1Q13228 472 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 GLCCI1Q86VQ1 547 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 CMTM4Q8IZR5 234 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 SLC43A2Q8N370 569 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 SLC7A6Q92536 515 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 SMCO4Q9NRQ5 59 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 TMEM265A0A087WTH1 108 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 TCRBV5S2A0A599 114 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 H0YIG0 161 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 H7C1Q1 480 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 DSCR3O14972 297 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 IL3RAP26951 378 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 C2orf76Q3KRA6 126 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 SPATA46Q5T0L3 261 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 THEM4Q5T1C6 240 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 ZNF626Q68DY1 528 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 CAMKMTQ7Z624 323 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 UBAC2Q8NBM4 344 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 NANPQ8TBE9 248 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 NTN4Q9HB63 628 aa10.41□□□□□ -0.74
USP53-201ENST00000274030 KIR2DS1A0A191URI9 304 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 OLFM2O95897 454 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 GLRA1P23415 457 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 ACKR3P25106 362 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 KIR2DS4P43632 304 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 RAB5CP51148 216 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 KIR2DS1Q14954 304 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 CATSPERDQ86XM0 798 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 GABRG1Q8N1C3 465 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 OR6K3Q8NGY3 331 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.4□□□□□ -0.74
USP53-201ENST00000274030 REEP6Q96HR9 211 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 NDUFB11Q9NX14 153 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 MTCH1Q9NZJ7 389 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 GAB2Q9UQC2 676 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 KRBOX1C9JBD0 128 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 KLK8O60259 260 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 PSMB3P49720 205 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 ARL16Q0P5N6 197 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 CDONQ4KMG0 1287 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 GCNT2Q8N0V5 402 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 TVP23CQ96ET8 276 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 BHLHE40O14503 412 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 ST8SIA3O43173 380 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 HNF1AP20823 631 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 HOXD11P31277 338 aaPredicted RBP10.4□□□□□ -0.74
USP53-201ENST00000274030 DOC2BQ14184 412 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 TMEM41BQ5BJD5 291 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 TOR2AQ5JU69 321 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 Q6ZNX1 250 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 MORN4Q8NDC4 146 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 ATF6BQ99941 703 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 MED18Q9BUE0 208 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 GABARAPL3Q9BY60 117 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 NPAP1Q9NZP6 1156 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 TSPAN12O95859 305 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 CCR5P51681 352 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 FOXF1Q12946 379 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 CD276Q5ZPR3 534 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 KLHDC8BQ8IXV7 354 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 RBPMSQ93062 196 aaKnown RBP10.4□□□□□ -0.74
USP53-201ENST00000274030 PINX1Q96BK5 328 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms