RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 CCDC163A0A0D9SF12 145 aa12.05□□□□□ -0.48
SMG9-201ENST00000270066 IMPA2O14732 288 aa12.05□□□□□ -0.48
SMG9-201ENST00000270066 OR1C1Q15619 314 aa12.05□□□□□ -0.48
SMG9-201ENST00000270066 TFAP2EQ6VUC0 442 aa12.05□□□□□ -0.48
SMG9-201ENST00000270066 RBMXL3Q8N7X1 1067 aaKnown RBP12.05□□□□□ -0.48
SMG9-201ENST00000270066 ATF6BQ99941 703 aa12.05□□□□□ -0.48
SMG9-201ENST00000270066 RNF32Q9H0A6 362 aa12.05□□□□□ -0.48
SMG9-201ENST00000270066 SCPEP1Q9HB40 452 aa12.05□□□□□ -0.48
SMG9-201ENST00000270066 PMS2P2O95744 297 aa12.05□□□□□ -0.48
SMG9-201ENST00000270066 CLDN1O95832 211 aa12.05□□□□□ -0.48
SMG9-201ENST00000270066 CPEP16870 476 aa12.05□□□□□ -0.48
SMG9-201ENST00000270066 TMEM215Q68D42 235 aa12.05□□□□□ -0.48
SMG9-201ENST00000270066 OR51F2Q8NH61 342 aa12.05□□□□□ -0.48
SMG9-201ENST00000270066 C2CD4CQ8TF44 421 aa12.05□□□□□ -0.48
SMG9-201ENST00000270066 ST8SIA4Q92187 359 aa12.05□□□□□ -0.48
SMG9-201ENST00000270066 DAZAP1Q96EP5 407 aaKnown RBP12.05□□□□□ -0.48
SMG9-201ENST00000270066 UHRF2Q96PU4 802 aa12.05□□□□□ -0.48
SMG9-201ENST00000270066 R4GMQ9 66 aa12.05□□□□□ -0.48
SMG9-201ENST00000270066 TBX19O60806 448 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 APEHP13798 732 aaKnown RBP12.04□□□□□ -0.48
SMG9-201ENST00000270066 SRP9P49458 86 aaKnown RBP12.04□□□□□ -0.48
SMG9-201ENST00000270066 HES1Q14469 280 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 PXT1Q8NFP0 134 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 CDX2Q99626 313 aaPredicted RBP12.04□□□□□ -0.48
SMG9-201ENST00000270066 CDCA4Q9BXL8 241 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 TGIF2Q9GZN2 237 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 PPM1DO15297 605 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 KLK10O43240 276 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 AKR7A2O43488 359 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 ATPAF1Q5TC12 328 aaPredicted RBP12.04□□□□□ -0.48
SMG9-201ENST00000270066 SHEQ5VZ18 495 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 USP51Q70EK9 711 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 LGI3Q8N145 548 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 SLC35G3Q8N808 338 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 OR4D9Q8NGE8 314 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 NIT2Q9NQR4 276 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.04□□□□□ -0.48
SMG9-201ENST00000270066 ZC3H12DA2A288 527 aaKnown RBP12.04□□□□□ -0.48
SMG9-201ENST00000270066 SLC2A10O95528 541 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 KANSL1Q7Z3B3 1105 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 ZBTB44Q8NCP5 570 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 NEURL2Q9BR09 285 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 SEC22CQ9BRL7 303 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 OPA3Q9H6K4 179 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 M0QYG6 137 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 C1QBP02746 253 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 ZNF718Q3SXZ3 478 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 GFRALQ6UXV0 394 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 CISD2Q8N5K1 135 aaKnown RBP12.04□□□□□ -0.48
SMG9-201ENST00000270066 OR1L3Q8NH93 324 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 REEP6Q96HR9 211 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 FBXO4Q9UKT5 387 aa12.04□□□□□ -0.48
SMG9-201ENST00000270066 BTBD17A6NE02 478 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 HSD17B6O14756 317 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 HS3ST1O14792 307 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 CSF3P09919 207 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 CT45A6P0DMU7 189 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 CT45A5P0DMU8 189 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 CT45A7P0DMV0 189 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 CT45A8P0DMV1 189 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 CT45A9P0DMV2 189 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 HOXD11P31277 338 aaPredicted RBP12.03□□□□□ -0.48
SMG9-201ENST00000270066 CCR9P51686 369 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 CT45A2Q5DJT8 189 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 CT45A1Q5HYN5 189 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 LAIR1Q6GTX8 287 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 CT45A3Q8NHU0 189 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 FAM234AQ9H0X4 552 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 MED29Q9NX70 200 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 COL5A3P25940 1745 aaPredicted RBP12.03□□□□□ -0.48
SMG9-201ENST00000270066 A0A096LPE4 126 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 A0A1W2PPZ6 126 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 DHHO43323 396 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 NRASP01111 189 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 FOSL1P15407 271 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 BAXQ07812 192 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 MYBPHQ13203 477 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 CORO6Q6QEF8 472 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 LSRQ86X29 649 aaPredicted RBP12.03□□□□□ -0.48
SMG9-201ENST00000270066 DTWD2Q8NBA8 298 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 SLC25A46Q96AG3 418 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 PUS1Q9Y606 427 aaKnown RBP eCLIP12.03□□□□□ -0.48
SMG9-201ENST00000270066 IGHV3-15A0A0B4J1V0 119 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 IL9P15248 144 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 S100A11P31949 105 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 DHRS13Q6UX07 377 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 RIMKLAQ8IXN7 391 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 BBS1Q8NFJ9 593 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 ARHGDIGQ99819 225 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 CLEC1BQ9P126 229 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 EXO1Q9UQ84 846 aaKnown RBP12.03□□□□□ -0.48
SMG9-201ENST00000270066 KIAA0100Q14667 2235 aaKnown RBP12.03□□□□□ -0.48
SMG9-201ENST00000270066 KCNE1BA0A087WTH5 132 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 TRABD2BA6NFA1 517 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 TOX3O15405 576 aaPredicted RBP12.03□□□□□ -0.48
SMG9-201ENST00000270066 SLC35A2P78381 396 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 DUSP2Q05923 314 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 AQP6Q13520 282 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 ZNF74Q16587 644 aa12.03□□□□□ -0.48
SMG9-201ENST00000270066 KIRREL2Q6UWL6 708 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms