RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ABHD5Q8WTS1 349 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 CMC2Q9NRP2 79 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 USP36Q9P275 1121 aaKnown RBP7.9□□□□□ -1.14
VAPB-201ENST00000265619 PLXNA2O75051 1894 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 A0A1B0GVT2 93 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 OR5H15A6NDH6 313 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 OR5H1A6NKK0 313 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 CA11O75493 328 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 ADAP1O75689 374 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 PSMB6P28072 239 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 RASGEF1BQ0VAM2 473 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 VITQ6UXI7 678 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 TMPRSS11FQ6ZWK6 438 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 OR2L13Q8N349 312 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 DOK4Q8TEW6 326 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 MITD1Q8WV92 249 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 MACROD1Q9BQ69 325 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 OR2AG1Q9H205 316 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 C6orf106Q9H6K1 298 aaPredicted RBP7.9□□□□□ -1.14
VAPB-201ENST00000265619 DUSP22Q9NRW4 184 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 CBLN4Q9NTU7 201 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 SLCO1B1Q9Y6L6 691 aa7.9□□□□□ -1.14
VAPB-201ENST00000265619 FANCMQ8IYD8 2048 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 IGLV3-16A0A075B6K0 115 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 FEZF1A0PJY2 475 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 UMAD1C9J7I0 102 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 C1QL1O75973 258 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 GZMBP10144 247 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 MAP3K8P41279 467 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 GPR1P46091 355 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 HYAL1Q12794 435 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 MOGAT2Q3SYC2 334 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 DMRTA1Q5VZB9 504 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 GPR137CQ8N3F9 429 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 OR4K13Q8NH42 304 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 ZCCHC10Q8TBK6 192 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 FAM174AQ8TBP5 190 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 SLC22A18Q96BI1 424 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 SEH1LQ96EE3 360 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 GNRHR2Q96P88 292 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 GAL3ST4Q96RP7 486 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 LMF1Q96S06 567 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 MFRPQ9BY79 579 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 ZNF223Q9UK11 482 aaPredicted RBP7.9□□□□□ -1.15
VAPB-201ENST00000265619 GOLT1BQ9Y3E0 138 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 KPTNQ9Y664 436 aa7.9□□□□□ -1.15
VAPB-201ENST00000265619 A0A1W2PP55 124 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 VSTM5A8MXK1 200 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 NUDT19A8MXV4 375 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 SLC31A1O15431 190 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 KAT7O95251 611 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 GPANK1O95872 356 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 C5AR1P21730 350 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 RGS8P57771 180 aaPredicted RBP7.89□□□□□ -1.15
VAPB-201ENST00000265619 POLR2LP62875 67 aaKnown RBP7.89□□□□□ -1.15
VAPB-201ENST00000265619 GXYLT1Q4G148 440 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 OR9A1PQ8NGU1 263 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 PACRGQ96M98 296 aaPredicted RBP7.89□□□□□ -1.15
VAPB-201ENST00000265619 HIST1H2BLQ99880 126 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 ZNF426Q9BUY5 554 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 PUS1Q9Y606 427 aaKnown RBP eCLIP7.89□□□□□ -1.15
VAPB-201ENST00000265619 MCIDASD6RGH6 385 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 PLGP00747 810 aaPredicted RBP7.89□□□□□ -1.15
VAPB-201ENST00000265619 SLC35G4P0C7Q5 338 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 TBC1D3HP0C7X1 549 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 CALCBP10092 127 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 AKR1C4P17516 323 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 DHPSP49366 369 aaPredicted RBP7.89□□□□□ -1.15
VAPB-201ENST00000265619 SKP1P63208 163 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 BIKQ13323 160 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 RUNX3Q13761 415 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 TBC1D3GQ6DHY5 549 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 RANBP3LQ86VV4 465 aaPredicted RBP7.89□□□□□ -1.15
VAPB-201ENST00000265619 THNSL2Q86YJ6 484 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 ZNF610Q8N9Z0 462 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 ACBD4Q8NC06 268 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 FRZBQ92765 325 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 MUCL1Q96DR8 90 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 MENTQ9BUN1 341 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 FLRT3Q9NZU0 649 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 HS3ST2Q9Y278 367 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 FBXO7Q9Y3I1 522 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 LTBP2Q14767 1821 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 CCDC187A0A096LP49 1063 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 SOX1O00570 391 aaPredicted RBP7.89□□□□□ -1.15
VAPB-201ENST00000265619 DLEU1O43261 78 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 PPP2R1BP30154 601 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 PRSS3P35030 304 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 BSGP35613 385 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 PPICP45877 212 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 MAPK8P45983 427 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 RAP1AP62834 184 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 MIDNQ504T8 468 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 LBHQ53QV2 105 aaPredicted RBP7.89□□□□□ -1.15
VAPB-201ENST00000265619 ARHGAP40Q5TG30 622 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 KHDRBS2Q5VWX1 349 aaKnown RBP7.89□□□□□ -1.15
VAPB-201ENST00000265619 RPL22L1Q6P5R6 122 aaKnown RBP7.89□□□□□ -1.15
VAPB-201ENST00000265619 ANKRD16Q6P6B7 361 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 LYG2Q86SG7 212 aa7.89□□□□□ -1.15
VAPB-201ENST00000265619 ZNF619Q8N2I2 560 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms