RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 CHRM4P08173 479 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 SNRPBP14678 240 aaKnown RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 MYOGP15173 224 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 HNRNPA2B1P22626 353 aaKnown RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 CTSCP53634 463 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 ECH1Q13011 328 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 PHYHD1Q5SRE7 291 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 WDR74Q6RFH5 385 aaPredicted RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 PUSL1Q8N0Z8 303 aaKnown RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 OR2L13Q8N349 312 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 CPXM2Q8N436 756 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 GHSRQ92847 366 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 REEP6Q96HR9 211 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 MACROD1Q9BQ69 325 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 ANKRD30BLA7E2S9 258 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 GALR3O60755 368 aaPredicted RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 PSMB6P28072 239 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 SLC35D3Q5M8T2 416 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 ZNF66Q6ZN08 573 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 MR1Q95460 341 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 WDR89Q96FK6 387 aaPredicted RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 TMPRSS13Q9BYE2 586 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 HHEXQ03014 270 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 XKR7Q5GH72 579 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 EXOSC6Q5RKV6 272 aaKnown RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 OR4A47Q6IF82 309 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 HSD11B1LQ7Z5J1 315 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 OR5AR1Q8NGP9 310 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 TOMM40LQ969M1 308 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 KLF16Q9BXK1 252 aaPredicted RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 HIDE1A8MVS5 230 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 NME2P1O60361 137 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 USF1P22415 310 aaPredicted RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 BDH1Q02338 343 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 C1orf185Q5T7R7 199 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 TCTEX1D1Q8N7M0 179 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 OLIG1Q8TAK6 271 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 TVP23CQ96ET8 276 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 NUDT11Q96G61 164 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 STARD10Q9Y365 291 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 TRAV34A0A0B4J273 112 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 TCRBV5S1A1TA0A578 114 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 LCATP04180 440 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 ADGRE4PQ86SQ3 457 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 TMEM151BQ8IW70 566 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 OR13C9Q8NGT0 318 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 HHIPL1Q96JK4 782 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 CIB3Q96Q77 187 aaPredicted RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 NMNAT2Q9BZQ4 307 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 GJD2Q9UKL4 321 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 SRPK3Q9UPE1 567 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 KIR2DS5A0A0G2JLQ3 304 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 A0A0G2JNG1 304 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 OR6C76A6NM76 312 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 KIR2DS3K7RE56 304 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 GFRA2O00451 464 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 PRDX1Q06830 199 aaKnown RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 GAMTQ14353 236 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 KIR2DS5Q14953 304 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 TMEM64Q6YI46 380 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 TRAPPC6BQ86SZ2 158 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 OR4D6Q8NGJ1 314 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 FAM71F1Q96KD3 344 aaPredicted RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 GDE1Q9NZC3 331 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 TICRRQ7Z2Z1 1910 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 FAM171A2A8MVW0 826 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 DUSP3P51452 185 aaPredicted RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 SLC14A1Q13336 389 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 MSMO1Q15800 293 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 HHIPQ96QV1 700 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 ZNF426Q9BUY5 554 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 OR51I2Q9H344 312 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 PLXND1Q9Y4D7 1925 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 PDGFBP01127 241 aaPredicted RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 TMIGD3P0DMS9 266 aaPredicted RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 IRF2P14316 349 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 GABRA1P14867 456 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 GCH1P30793 250 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 PSMB10P40306 273 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 MTCP1P56278 107 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 UBE2G2P60604 165 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 SAMD13Q5VXD3 122 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 CLEC2AQ6UVW9 174 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 RIMKLAQ8IXN7 391 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 C1QTNF3Q9BXJ4 246 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 PKIBQ9C010 78 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 TCRBV5S2A0A599 114 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 GPR75O95800 540 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 NTSR1P30989 418 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 SLC7A9P82251 487 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 ZNF74Q16587 644 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 PDLIM3Q53GG5 364 aaPredicted RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 SGCZQ96LD1 299 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 NKX3-1Q99801 234 aaPredicted RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 WDR76Q9H967 626 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 SIRT3Q9NTG7 399 aaPredicted RBP5.23□□□□□ -1.57
VCAN-201ENST00000265077 CBLN4Q9NTU7 201 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 ZMIZ1Q9ULJ6 1067 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 UBR3Q6ZT12 1888 aa5.23□□□□□ -1.57
VCAN-201ENST00000265077 FAM183AA6NL82 134 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms