RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 DCDC5Q6ZRR9 648 aa15.9■□□□□ 0.14
SDF4-201ENST00000263741 LILRB1Q8NHL6 650 aaPredicted RBP15.9■□□□□ 0.14
SDF4-201ENST00000263741 TMEM163Q8TC26 289 aa15.9■□□□□ 0.14
SDF4-201ENST00000263741 SMAP2Q8WU79 429 aaPredicted RBP15.9■□□□□ 0.14
SDF4-201ENST00000263741 HRASLS5Q96KN8 279 aa15.9■□□□□ 0.14
SDF4-201ENST00000263741 OR51B6Q9H340 312 aa15.9■□□□□ 0.14
SDF4-201ENST00000263741 DNAJC27Q9NZQ0 273 aa15.9■□□□□ 0.14
SDF4-201ENST00000263741 GMPPBQ9Y5P6 360 aa15.9■□□□□ 0.14
SDF4-201ENST00000263741 IGHV2OR16-5A0A0B4J2B6 119 aa15.89■□□□□ 0.13
SDF4-201ENST00000263741 SELENOFO60613 162 aa15.89■□□□□ 0.13
SDF4-201ENST00000263741 GABARAPO95166 117 aa15.89■□□□□ 0.13
SDF4-201ENST00000263741 SPARCP09486 303 aa15.89■□□□□ 0.13
SDF4-201ENST00000263741 PCMT1P22061 227 aa15.89■□□□□ 0.13
SDF4-201ENST00000263741 FMO3P31513 532 aa15.89■□□□□ 0.13
SDF4-201ENST00000263741 EFNB1P98172 346 aa15.89■□□□□ 0.13
SDF4-201ENST00000263741 SLC7A6Q92536 515 aa15.89■□□□□ 0.13
SDF4-201ENST00000263741 IMPAD1Q9NX62 359 aa15.89■□□□□ 0.13
SDF4-201ENST00000263741 POU2F3Q9UKI9 436 aa15.89■□□□□ 0.13
SDF4-201ENST00000263741 CCDC182A6NF36 153 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 CLDN25C9JDP6 229 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 E9PQ18 207 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 DOK2O60496 412 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 GLCEO94923 617 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 SERPINA5P05154 406 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 NAA10P41227 235 aaPredicted RBP15.88■□□□□ 0.13
SDF4-201ENST00000263741 CDH11P55287 796 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 LSM6P62312 80 aaKnown RBP15.88■□□□□ 0.13
SDF4-201ENST00000263741 SLC16A12Q6ZSM3 486 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 CENPSQ8N2Z9 138 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 FAM169BQ8N8A8 192 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 SLC30A7Q8NEW0 376 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 CNIH3Q8TBE1 160 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 SGCDQ92629 289 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 AKAP1Q92667 903 aaKnown RBP eCLIP15.88■□□□□ 0.136e-11■■■■□ 22.7
SDF4-201ENST00000263741 ERGIC3Q9Y282 383 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 TIMM10BQ9Y5J6 103 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 MRPL3P09001 348 aaKnown RBP15.88■□□□□ 0.13
SDF4-201ENST00000263741 ZNF823P16415 610 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 CCNOP22674 350 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 GP2P55259 537 aaKnown RBP15.88■□□□□ 0.13
SDF4-201ENST00000263741 CDC42P60953 191 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 SPCS2Q15005 226 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 SLC18B1Q6NT16 456 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 VASH1Q7L8A9 365 aaPredicted RBP15.88■□□□□ 0.13
SDF4-201ENST00000263741 DPPA2Q7Z7J5 298 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 OR6N2Q8NGY6 317 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 PITX2Q99697 317 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 KCNS3Q9BQ31 491 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 PLEKHF2Q9H8W4 249 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 PLEK2Q9NYT0 353 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 NDRG4Q9ULP0 352 aaKnown RBP15.88■□□□□ 0.13
SDF4-201ENST00000263741 PDZD2O15018 2839 aa15.88■□□□□ 0.13
SDF4-201ENST00000263741 LOC100509620A0A075B734 347 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 PRODHO43272 600 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 SGCEO43556 437 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 CRYAAP02489 173 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 PCBD1P61457 104 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 PLP2Q04941 152 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 SCRN3Q0VDG4 424 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 CCDC92Q53HC0 331 aaPredicted RBP15.87■□□□□ 0.13
SDF4-201ENST00000263741 LAIR2Q6ISS4 152 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 IPCEF1Q8WWN9 437 aaPredicted RBP15.87■□□□□ 0.13
SDF4-201ENST00000263741 MAP6Q96JE9 813 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 CDADC1Q9BWV3 514 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 CYB5R1Q9UHQ9 305 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 GDF2Q9UK05 429 aaPredicted RBP15.87■□□□□ 0.13
SDF4-201ENST00000263741 ATP23Q9Y6H3 246 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 IQCMA0A1B0GVH7 501 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 J3QRK9 145 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 RGS10O43665 173 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 INMTO95050 263 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 STOMP27105 288 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 HTR5AP47898 357 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 DGUOKQ16854 277 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 C1QTNF12Q5T7M4 302 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 AADACL4Q5VUY2 407 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 VHLLQ6RSH7 139 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 PAK1IP1Q9NWT1 392 aaPredicted RBP15.87■□□□□ 0.13
SDF4-201ENST00000263741 KCNG2Q9UJ96 466 aa15.87■□□□□ 0.13
SDF4-201ENST00000263741 E7EQL1 145 aa15.86■□□□□ 0.13
SDF4-201ENST00000263741 ZNF593O00488 134 aaPredicted RBP15.86■□□□□ 0.13
SDF4-201ENST00000263741 XPNPEP2O43895 674 aa15.86■□□□□ 0.13
SDF4-201ENST00000263741 FAM20BO75063 409 aa15.86■□□□□ 0.13
SDF4-201ENST00000263741 SULT1C4O75897 302 aa15.86■□□□□ 0.13
SDF4-201ENST00000263741 GOSR1O95249 250 aa15.86■□□□□ 0.13
SDF4-201ENST00000263741 EMX1Q04741 257 aaPredicted RBP15.86■□□□□ 0.13
SDF4-201ENST00000263741 HGFACQ04756 655 aa15.86■□□□□ 0.13
SDF4-201ENST00000263741 CTF1Q16619 201 aa15.86■□□□□ 0.13
SDF4-201ENST00000263741 C3orf36Q3SXR2 165 aa15.86■□□□□ 0.13
SDF4-201ENST00000263741 ZNF672Q499Z4 452 aaPredicted RBP15.86■□□□□ 0.13
SDF4-201ENST00000263741 SPATC1Q76KD6 591 aa15.86■□□□□ 0.13
SDF4-201ENST00000263741 TIGD4Q8IY51 512 aa15.86■□□□□ 0.13
SDF4-201ENST00000263741 MINDY2Q8NBR6 621 aa15.86■□□□□ 0.13
SDF4-201ENST00000263741 INTS14Q96SY0 518 aa15.86■□□□□ 0.13
SDF4-201ENST00000263741 DUSP21Q9H596 190 aa15.86■□□□□ 0.13
SDF4-201ENST00000263741 MOV10Q9HCE1 1003 aaKnown RBP15.86■□□□□ 0.13
SDF4-201ENST00000263741 C5orf49A4QMS7 147 aa15.85■□□□□ 0.13
SDF4-201ENST00000263741 APOL3O95236 402 aa15.85■□□□□ 0.13
SDF4-201ENST00000263741 DBHP09172 617 aa15.85■□□□□ 0.13
SDF4-201ENST00000263741 FAM157BP0CG42 384 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms