RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 BCL2L10Q9HD36 194 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 CACFD1Q9UGQ2 172 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 KCNE5Q9UJ90 142 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 MRPS18CQ9Y3D5 142 aaKnown RBP12.81□□□□□ -0.36
SCARF1-201ENST00000263071 DCTN6O00399 190 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 MFNGO00587 321 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 GUSBP08236 651 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 RPS15P62841 145 aaKnown RBP12.81□□□□□ -0.36
SCARF1-201ENST00000263071 ZNF85Q03923 595 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 TLE4Q04727 773 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 ZNF345Q14585 488 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 FAM219AQ8IW50 185 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 TMEM52Q8NDY8 209 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 NUDCD2Q8WVJ2 157 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 RSC1A1Q92681 617 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 RERGQ96A58 199 aaPredicted RBP12.81□□□□□ -0.36
SCARF1-201ENST00000263071 MALSU1Q96EH3 234 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 TRPV4Q9HBA0 871 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 STARD10Q9Y365 291 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 CHD9Q3L8U1 2897 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 HRKO00198 91 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 SOD3P08294 240 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 CD79AP11912 226 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 S1PR1P21453 382 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 EMDP50402 254 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 PPP1CAP62136 330 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 GUCA2AQ02747 115 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 TFF2Q03403 129 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 HGFACQ04756 655 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 EGR3Q06889 387 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 PRAMEF17Q5VTA0 474 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 OR2T2Q6IF00 324 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 ZNF676Q8N7Q3 588 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 RGP1Q92546 391 aaPredicted RBP12.81□□□□□ -0.36
SCARF1-201ENST00000263071 PELI1Q96FA3 418 aa12.81□□□□□ -0.36
SCARF1-201ENST00000263071 ADAD1Q96M93 576 aaKnown RBP12.81□□□□□ -0.36
SCARF1-201ENST00000263071 CTSVO60911 334 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 NSA2O95478 260 aaKnown RBP12.8□□□□□ -0.36
SCARF1-201ENST00000263071 CXCL10P02778 98 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 CT62P0C5K7 136 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 RPL29P47914 159 aaKnown RBP12.8□□□□□ -0.36
SCARF1-201ENST00000263071 GAS6Q14393 721 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 NCR3LG1Q68D85 454 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 SLC35D2Q76EJ3 337 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 GJD3Q8N144 294 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 OR5R1Q8NH85 324 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 NOP16Q9Y3C1 178 aaKnown RBP12.8□□□□□ -0.36
SCARF1-201ENST00000263071 CFAP54Q96N23 3096 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 ARHGEF17Q96PE2 2063 aaPredicted RBP12.8□□□□□ -0.36
SCARF1-201ENST00000263071 CPED1A4D0V7 1026 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 CDC14CA4D256 554 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 NXPH2O95156 264 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 PTBP3O95758 552 aaKnown RBP12.8□□□□□ -0.36
SCARF1-201ENST00000263071 CTSBP07858 339 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 RAB6AP20340 208 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 APLNRP35414 380 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 THBS4P35443 961 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 LEG1Q6P5S2 330 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 PXKQ7Z7A4 578 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 PRR22Q8IZ63 422 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 OR10A7Q8NGE5 316 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 OR52R1Q8NGF1 315 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 OR1J1Q8NGS3 322 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 OR6N2Q8NGY6 317 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 SP7Q8TDD2 431 aaPredicted RBP12.8□□□□□ -0.36
SCARF1-201ENST00000263071 FGF13Q92913 245 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 RRNAD1Q96FB5 475 aaKnown RBP12.8□□□□□ -0.36
SCARF1-201ENST00000263071 ADGRL4Q9HBW9 690 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 UBQLN4Q9NRR5 601 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 MDC1Q14676 2089 aaKnown RBP12.8□□□□□ -0.36
SCARF1-201ENST00000263071 PLXNB3Q9ULL4 1909 aa12.8□□□□□ -0.36
SCARF1-201ENST00000263071 ELOA3CA0A087WX78 387 aaPredicted RBP12.79□□□□□ -0.36
SCARF1-201ENST00000263071 M0QZK8 103 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 CTDSPLO15194 276 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 ARL6IP5O75915 188 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 PEBP1P30086 187 aaKnown RBP12.79□□□□□ -0.36
SCARF1-201ENST00000263071 DRD3P35462 400 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 OR3A1P47881 315 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 SIRPAP78324 504 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 RHEBQ15382 184 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 PCGF3Q3KNV8 242 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 DCAF10Q5QP82 559 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 TANGO2Q6ICL3 276 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 SSX7Q7RTT5 188 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 ANGPTL5Q86XS5 388 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 SLC35F2Q8IXU6 374 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 IFI44Q8TCB0 444 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 RNASE8Q8TDE3 154 aaKnown RBP12.79□□□□□ -0.36
SCARF1-201ENST00000263071 TSEN15Q8WW01 171 aaKnown RBP12.79□□□□□ -0.36
SCARF1-201ENST00000263071 MVB12AQ96EY5 273 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 ARHGDIGQ99819 225 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 CDRT15L2A8MXV6 281 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 PNPP00491 289 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 HTR2CP28335 458 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 ZNF136P52737 540 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 EFNB1P98172 346 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 FZD5Q13467 585 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 OR5I1Q13606 314 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 IL10RAQ13651 578 aa12.79□□□□□ -0.36
SCARF1-201ENST00000263071 CD300LDQ6UXZ3 194 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms