RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 LSM5Q9Y4Y9 91 aaKnown RBP8.65□□□□□ -1.02
SIM1-201ENST00000262901 PRR19A6NJB7 356 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 SURF4O15260 269 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 ZNF28P17035 718 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 RAB4AP20338 218 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 PEBP1P30086 187 aaKnown RBP8.65□□□□□ -1.02
SIM1-201ENST00000262901 EXOSC2Q13868 293 aaKnown RBP8.65□□□□□ -1.02
SIM1-201ENST00000262901 SLC9A3R2Q15599 337 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 KCNMB1Q16558 191 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 TMEM164Q5U3C3 297 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 GPR139Q6DWJ6 353 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 CDPF1Q6NVV7 123 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 MAML2Q8IZL2 1156 aaPredicted RBP8.65□□□□□ -1.02
SIM1-201ENST00000262901 AGBL5Q8NDL9 886 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 FCRL1Q96LA6 429 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 C20orf85Q9H1P6 137 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 ZNF442Q9H7R0 627 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 PRDM7Q9NQW5 492 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 DUSP22Q9NRW4 184 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 C19orf53Q9UNZ5 99 aaPredicted RBP8.65□□□□□ -1.02
SIM1-201ENST00000262901 EMC9Q9Y3B6 208 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 B3GALT1Q9Y5Z6 326 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 DOCK9Q9BZ29 2069 aa8.65□□□□□ -1.02
SIM1-201ENST00000262901 LAMA2P24043 3122 aaKnown RBP8.65□□□□□ -1.03
SIM1-201ENST00000262901 BTBD17A6NE02 478 aa8.65□□□□□ -1.03
SIM1-201ENST00000262901 H7C417 338 aa8.65□□□□□ -1.03
SIM1-201ENST00000262901 DVL2O14641 736 aa8.65□□□□□ -1.03
SIM1-201ENST00000262901 C1QBP02746 253 aa8.65□□□□□ -1.03
SIM1-201ENST00000262901 SLC35E2P0CK97 266 aa8.65□□□□□ -1.03
SIM1-201ENST00000262901 NFYAP23511 347 aaPredicted RBP8.65□□□□□ -1.03
SIM1-201ENST00000262901 MRPS10P82664 201 aaKnown RBP8.65□□□□□ -1.03
SIM1-201ENST00000262901 ZNF585AQ6P3V2 769 aa8.65□□□□□ -1.03
SIM1-201ENST00000262901 TMEM108Q6UXF1 575 aa8.65□□□□□ -1.03
SIM1-201ENST00000262901 OR51T1Q8NGJ9 327 aa8.65□□□□□ -1.03
SIM1-201ENST00000262901 MFSD8Q8NHS3 518 aa8.65□□□□□ -1.03
SIM1-201ENST00000262901 PAQR8Q8TEZ7 354 aa8.65□□□□□ -1.03
SIM1-201ENST00000262901 HOXB13Q92826 284 aaPredicted RBP8.65□□□□□ -1.03
SIM1-201ENST00000262901 NUDT16L1Q9BRJ7 211 aaKnown RBP8.65□□□□□ -1.03
SIM1-201ENST00000262901 ZNF436Q9C0F3 470 aaPredicted RBP8.65□□□□□ -1.03
SIM1-201ENST00000262901 FGF21Q9NSA1 209 aa8.65□□□□□ -1.03
SIM1-201ENST00000262901 FBXL4Q9UKA2 621 aa8.65□□□□□ -1.03
SIM1-201ENST00000262901 A0A0U1RQV5 110 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 JMJD7P0C870 316 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 LIMS3P0CW19 117 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 LIMS4P0CW20 117 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 CRYBB2P43320 205 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 MAGEB1P43366 347 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 ZFP36L2P47974 494 aaKnown RBP8.64□□□□□ -1.03
SIM1-201ENST00000262901 CDC34P49427 236 aaPredicted RBP8.64□□□□□ -1.03
SIM1-201ENST00000262901 EMP2P54851 167 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 DMRTC1Q5HYR2 192 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 CLLU1Q5K131 121 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 GLYATL3Q5SZD4 288 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 SSX6Q7RTT6 188 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 ZNF383Q8NA42 475 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 STEAP2Q8NFT2 490 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 OR4N2Q8NGD1 307 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 SELENOIQ9C0D9 397 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 C12orf49Q9H741 205 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 CUTCQ9NTM9 273 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 NDRG3Q9UGV2 375 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 IGHV3-20A0A0C4DH32 117 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 hCG_1807616A0A1W2PRN6 198 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 TNFSF14O43557 240 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 DNAJB6O75190 326 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 NXPH2O95156 264 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 S100A8P05109 93 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 PNLIPP16233 465 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 SLC6A8P48029 635 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 RFX2P48378 723 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 CCL7P80098 99 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 PLGLB1Q02325 96 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 TCTE3Q8IZS6 198 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 OR6V1Q8N148 313 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 SLC52A3Q9NQ40 469 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 PLEK2Q9NYT0 353 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 HIF3AQ9Y2N7 669 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 SCN8AQ9UQD0 1980 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 CACNA1HO95180 2353 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 RFPL4AA6NLU0 287 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 RFPL4AL1F8VTS6 287 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 FFAR1O14842 300 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 HCRTR1O43613 425 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 UTS2O95399 124 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 NPSP0C0P6 89 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 TDGF1P13385 188 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 NUTF2P61970 127 aaKnown RBP8.64□□□□□ -1.03
SIM1-201ENST00000262901 PPP1CAP62136 330 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 RBX1P62877 108 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 CAMK2DQ13557 499 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 PRAMEF20Q5VT98 475 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 MARCH3Q86UD3 253 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 ZNF595Q8IYB9 648 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 OR51S1Q8NGJ8 323 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 OR5L2Q8NGL0 311 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 NT5CQ8TCD5 201 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 MS4A3Q96HJ5 214 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 SFXN2Q96NB2 322 aa8.64□□□□□ -1.03
SIM1-201ENST00000262901 CCNL2Q96S94 520 aaPredicted RBP8.64□□□□□ -1.03
SIM1-201ENST00000262901 EMC6Q9BV81 110 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms