RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 WDR88Q6ZMY6 472 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 ZNF620Q6ZNG0 422 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 VASH2Q86V25 355 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 KCNRGQ8N5I3 272 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 OR4Q3Q8NH05 313 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 TMEM30AQ9NV96 361 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 SHISA8B8ZZ34 492 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 GLAP06280 429 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 CPEP16870 476 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 PI3P19957 117 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 ECI1P42126 302 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 GPR12P47775 334 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 GP2P55259 537 aaKnown RBP11□□□□□ -0.65
COL8A1-201ENST00000261037 DPTQ07507 201 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 BAMBIQ13145 260 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 AGERQ15109 404 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 FCRL6Q6DN72 434 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 DBX2Q6ZNG2 339 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 LHFPL2Q6ZUX7 228 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 FGF14Q92915 247 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 B3GALT5Q9Y2C3 310 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 SERTM2A0A1B0GWG4 89 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 TMEM235A6NFC5 223 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 DSCR3O14972 297 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 DUSP1P28562 367 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 OPRM1P35372 400 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 NKX2-1P43699 371 aaPredicted RBP11□□□□□ -0.65
COL8A1-201ENST00000261037 SLC6A12P48065 614 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 CCL7P80098 99 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 DUSP8Q13202 625 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 PDZD11Q5EBL8 140 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 PLXDC2Q6UX71 529 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 ZFP62Q8NB50 900 aaPredicted RBP11□□□□□ -0.65
COL8A1-201ENST00000261037 PLA2G12AQ9BZM1 189 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 FN3KRPQ9HA64 309 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 FLVCR2Q9UPI3 526 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 SLC22A13Q9Y226 551 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 M0R135 149 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 HLA-HP01893 362 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 CDAP32320 146 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 CAPZBP47756 277 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 UBE2IP63279 158 aaKnown RBP11□□□□□ -0.65
COL8A1-201ENST00000261037 DBPQ10586 325 aaPredicted RBP11□□□□□ -0.65
COL8A1-201ENST00000261037 HMGN3Q15651 99 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 TMEM41BQ5BJD5 291 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 SPANXN5Q5MJ07 72 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 SPATA46Q5T0L3 261 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 RBPMSQ93062 196 aaKnown RBP11□□□□□ -0.65
COL8A1-201ENST00000261037 TVP23CQ96ET8 276 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 ZNF799Q96GE5 643 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 NIPSNAP3BQ9BS92 247 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 SARGQ9BW04 601 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 SLCO5A1Q9H2Y9 848 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 ISG20L2Q9H9L3 353 aaKnown RBP11□□□□□ -0.65
COL8A1-201ENST00000261037 NDRG4Q9ULP0 352 aaKnown RBP11□□□□□ -0.65
COL8A1-201ENST00000261037 F6UZH7 168 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 ZNF195O14628 629 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 GPX5O75715 221 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 BSGP35613 385 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 MYBPHQ13203 477 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 HAGHQ16775 308 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 TOR2AQ5JU69 321 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 PLPP6Q8IY26 295 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 ZCCHC4Q9H5U6 513 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 MED9Q9NWA0 146 aa11□□□□□ -0.65
COL8A1-201ENST00000261037 MEIKINA0A087WXM9 373 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 TRGV8A0A0C4DH27 118 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 LGALS8O00214 317 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 NRASP01111 189 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 SMIM18P0DKX4 95 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 B4GALT1P15291 398 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 CTRB1P17538 263 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 INSM1Q01101 510 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-201ENST00000261037 THEM4Q5T1C6 240 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 CTRB2Q6GPI1 263 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 DDOQ99489 341 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 PBOV1Q9GZY1 135 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 NTN4Q9HB63 628 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 AK3Q9UIJ7 227 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 KRBOX1C9JBD0 128 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 IL2RAP01589 272 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 ZGLP1P0C6A0 271 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 PAX6P26367 422 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 AVPI1Q5T686 147 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 TMEM200AQ86VY9 491 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 MORN4Q8NDC4 146 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 OR2AE1Q8NHA4 323 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 SLC35E1Q96K37 410 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 TCEAL7Q9BRU2 100 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 RNF150Q9ULK6 438 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 SLC17A4Q9Y2C5 497 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 V9GYS6 101 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 K7EQM0 130 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 UPK1AO00322 258 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 SPRY1O43609 319 aaPredicted RBP10.99□□□□□ -0.65
COL8A1-201ENST00000261037 ACKR3P25106 362 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 ARR3P36575 388 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 RAB13P51153 203 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 UBE2G1P62253 170 aa10.99□□□□□ -0.65
COL8A1-201ENST00000261037 DOC2BQ14184 412 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms