RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 NANPQ8TBE9 248 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 FANK1Q8TC84 345 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 NMNAT3Q96T66 252 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 GORASP2Q9H8Y8 452 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 WDR76Q9H967 626 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 MMP26Q9NRE1 261 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 TUBG2Q9NRH3 451 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 PPP1R3CQ9UQK1 317 aa16.03■□□□□ 0.16
TM6SF1-201ENST00000258909 IGLV1-36A0A0B4J1U3 117 aa16.02■□□□□ 0.15
TM6SF1-201ENST00000258909 IGHV3-64DA0A0J9YX35 117 aa16.02■□□□□ 0.15
TM6SF1-201ENST00000258909 SEMG1P04279 462 aa16.02■□□□□ 0.15
TM6SF1-201ENST00000258909 ACTG1P63261 375 aa16.02■□□□□ 0.15
TM6SF1-201ENST00000258909 ZMYND11Q15326 602 aa16.02■□□□□ 0.15
TM6SF1-201ENST00000258909 RFX4Q33E94 735 aa16.02■□□□□ 0.15
TM6SF1-201ENST00000258909 OR6V1Q8N148 313 aa16.02■□□□□ 0.15
TM6SF1-201ENST00000258909 ZNF283Q8N7M2 679 aa16.02■□□□□ 0.15
TM6SF1-201ENST00000258909 OR10AD1Q8NGE0 317 aa16.02■□□□□ 0.15
TM6SF1-201ENST00000258909 OR4K13Q8NH42 304 aa16.02■□□□□ 0.15
TM6SF1-201ENST00000258909 COG8Q96MW5 612 aa16.02■□□□□ 0.15
TM6SF1-201ENST00000258909 SIGLEC11Q96RL6 698 aa16.02■□□□□ 0.15
TM6SF1-201ENST00000258909 OR52D1Q9H346 318 aa16.02■□□□□ 0.15
TM6SF1-201ENST00000258909 IL19Q9UHD0 177 aa16.02■□□□□ 0.15
TM6SF1-201ENST00000258909 B9D1Q9UPM9 204 aa16.02■□□□□ 0.15
TM6SF1-201ENST00000258909 OR10H3O60404 316 aa16.01■□□□□ 0.15
TM6SF1-201ENST00000258909 SNX3O60493 162 aa16.01■□□□□ 0.15
TM6SF1-201ENST00000258909 RAC2P15153 192 aa16.01■□□□□ 0.15
TM6SF1-201ENST00000258909 HIST1H1CP16403 213 aaKnown RBP16.01■□□□□ 0.15
TM6SF1-201ENST00000258909 CRABP1P29762 137 aa16.01■□□□□ 0.15
TM6SF1-201ENST00000258909 PRSS12P56730 875 aa16.01■□□□□ 0.15
TM6SF1-201ENST00000258909 BTG1P62324 171 aa16.01■□□□□ 0.15
TM6SF1-201ENST00000258909 JAZF1Q86VZ6 243 aa16.01■□□□□ 0.15
TM6SF1-201ENST00000258909 LINC00346Q8IVM7 164 aa16.01■□□□□ 0.15
TM6SF1-201ENST00000258909 KLHL36Q8N4N3 616 aa16.01■□□□□ 0.15
TM6SF1-201ENST00000258909 GJC3Q8NFK1 279 aa16.01■□□□□ 0.15
TM6SF1-201ENST00000258909 ZFAND2BQ8WV99 257 aa16.01■□□□□ 0.15
TM6SF1-201ENST00000258909 IFT27Q9BW83 186 aa16.01■□□□□ 0.15
TM6SF1-201ENST00000258909 FN3KQ9H479 309 aa16.01■□□□□ 0.15
TM6SF1-201ENST00000258909 H0YL77 283 aa16■□□□□ 0.15
TM6SF1-201ENST00000258909 SURF4O15260 269 aa16■□□□□ 0.15
TM6SF1-201ENST00000258909 FOXH1O75593 365 aa16■□□□□ 0.15
TM6SF1-201ENST00000258909 ZNF205O95201 554 aa16■□□□□ 0.15
TM6SF1-201ENST00000258909 GATA3P23771 443 aa16■□□□□ 0.15
TM6SF1-201ENST00000258909 SLC6A6P31641 620 aa16■□□□□ 0.15
TM6SF1-201ENST00000258909 HIST1H3AP68431 136 aa16■□□□□ 0.15
TM6SF1-201ENST00000258909 HIST2H3PS2Q5TEC6 136 aa16■□□□□ 0.15
TM6SF1-201ENST00000258909 DNM1P34Q6PK57 102 aa16■□□□□ 0.15
TM6SF1-201ENST00000258909 USP43Q70EL4 1123 aa16■□□□□ 0.15
TM6SF1-201ENST00000258909 HIST2H3AQ71DI3 136 aa16■□□□□ 0.15
TM6SF1-201ENST00000258909 LRRC28Q86X40 367 aaPredicted RBP16■□□□□ 0.15
TM6SF1-201ENST00000258909 BPIFB2Q8N4F0 458 aa16■□□□□ 0.15
TM6SF1-201ENST00000258909 SPICQ8N5J4 248 aa16■□□□□ 0.15
TM6SF1-201ENST00000258909 BHLHE23Q8NDY6 225 aa16■□□□□ 0.15
TM6SF1-201ENST00000258909 ZNF420Q8TAQ5 688 aaPredicted RBP16■□□□□ 0.15
TM6SF1-201ENST00000258909 PATZ1Q9HBE1 687 aaKnown RBP16■□□□□ 0.15
TM6SF1-201ENST00000258909 GCM1Q9NP62 436 aa16■□□□□ 0.15
TM6SF1-201ENST00000258909 RPRD1BQ9NQG5 326 aaKnown RBP16■□□□□ 0.15
TM6SF1-201ENST00000258909 TRAPPC2LH3BP13 241 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 RENP00797 406 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 CFPP27918 469 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 RRM2P31350 389 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 RGS6P49758 472 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 SMIM11AP58511 58 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 RSPO1Q2MKA7 263 aaPredicted RBP15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 FBXW12Q6X9E4 464 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 CFAP77Q6ZQR2 320 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 CPLX4Q7Z7G2 160 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 DEFB108BQ8NET1 73 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 SLC26A10Q8NG04 563 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 OR8G5Q8NG78 346 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 OR5L1Q8NGL2 311 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 APOBEC3DQ96AK3 386 aaPredicted RBP15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 NSMCE2Q96MF7 247 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 CDRT15Q96T59 188 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 COQ7Q99807 217 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 HDHD2Q9H0R4 259 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 ESM1Q9NQ30 184 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 MAGEL2Q9UJ55 1249 aa15.99■□□□□ 0.15
TM6SF1-201ENST00000258909 TMEM178BH3BS89 294 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 TRIM77I1YAP6 450 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 ARPC2O15144 300 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 CYB5R3P00387 301 aaPredicted RBP15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 FSHBP01225 129 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 FABP3P05413 133 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 HSD17B1P14061 328 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 FPR3P25089 353 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 NOS3P29474 1203 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 SLC6A9P48067 706 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 MMP16P51512 607 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 COX10Q12887 443 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 TMEM155Q4W5P6 130 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 SLC35F1Q5T1Q4 408 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 SDR9C7Q8NEX9 313 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 FAM216AQ8WUB2 273 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 GCDHQ92947 438 aaPredicted RBP15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 MCUR1Q96AQ8 359 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 ZNF582Q96NG8 517 aaPredicted RBP15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 SUCNR1Q9BXA5 334 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 ARL8BQ9NVJ2 186 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 CD300AQ9UGN4 299 aa15.98■□□□□ 0.15
TM6SF1-201ENST00000258909 ATPIF1Q9UII2 106 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms