RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 PPP1R8Q12972 351 aaKnown RBP12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 GPR119Q8TDV5 335 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 CASTOR1Q8WTX7 329 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 PPA2Q9H2U2 334 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 TMEM30CPA0ZSE6 113 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 J3QW42 95 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 ATXN7O15265 892 aaPredicted RBP12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 TBPP20226 339 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 CASP3P42574 277 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 PDLIM4P50479 330 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 VMA21Q3ZAQ7 101 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 FAM198BQ6UWH4 519 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 UNQ6494/PRO21346Q6UXR6 183 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 SLC35G3Q8N808 338 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 OR1M1Q8NGA1 313 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 OR10J5Q8NHC4 309 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 ADAT1Q9BUB4 502 aaKnown RBP12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 HRASLSQ9HDD0 168 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 COL4A1P02462 1669 aa12.08□□□□□ -0.48
PRPF38A-201ENST00000257181 RPS10-NUDT3A0A1W2PQS6 291 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 AQP7O14520 342 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 ZNF658BQ4V348 819 aaPredicted RBP12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 FBXW9Q5XUX1 488 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 TMPRSS11FQ6ZWK6 438 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 Q8N402 240 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 OR13C9Q8NGT0 318 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 BARD1Q99728 777 aaKnown RBP12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 DEFA4P12838 97 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 KHDC1LQ5JSQ8 128 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 CCDC144NLQ6NUI1 221 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 PRSS35Q8N3Z0 413 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 NANPQ8TBE9 248 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 SLCO4A1Q96BD0 722 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 MRPS24Q96EL2 167 aaKnown RBP12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 HES4Q9HCC6 221 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 ASH2LQ9UBL3 628 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 SLC23A1Q9UHI7 598 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 SBF1O95248 1867 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 OTOL1A6NHN0 477 aaPredicted RBP12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 IFNA17P01571 189 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 HOXB3P14651 431 aaPredicted RBP12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 SPI1P17947 270 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 GABRA6Q16445 453 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 PRR18Q8N4B5 295 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 SLC25A40Q8TBP6 338 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 Q96M85 177 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 SCNM1Q9BWG6 230 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 K7EQM0 130 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 NCR1O76036 304 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 NUDT7P0C024 238 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 CRHBPP24387 322 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 DSCR9P59020 149 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 GRK1Q15835 563 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 SSX1Q16384 188 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 CREB3L2Q70SY1 520 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 ARHGEF39Q8N4T4 335 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 ST6GALNAC5Q9BVH7 336 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 CES1P1Q9UKY3 287 aa12.07□□□□□ -0.48
PRPF38A-201ENST00000257181 TMEM129A0AVI4 362 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 P2RY10O00398 339 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 PPP1CBP62140 327 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 SPOCK1Q08629 439 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 FAM74A1Q5RGS3 127 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 SPINK14Q6IE38 97 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 RANBP3Q9H6Z4 567 aaPredicted RBP12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 NDUFAF4Q9P032 175 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 TAAR3PQ9P1P4 343 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 GDF2Q9UK05 429 aaPredicted RBP12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 NUBP2Q9Y5Y2 271 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 ARPC3O15145 178 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 ATF1P18846 271 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 MAGEA5P43359 124 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 EMDP50402 254 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 HES5Q5TA89 166 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 METTL11BQ5VVY1 283 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 FAM26EQ8N5C1 309 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 S100PBPQ96BU1 408 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 ADTRPQ96IZ2 230 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 PBDC1Q9BVG4 233 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 OR2M3Q8NG83 312 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 OR13D1Q8NGV5 346 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 OR6C3Q9NZP0 311 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 DOC2BQ14184 412 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 TFAP2CQ92754 450 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 PIGTQ969N2 578 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 LGALS12Q96DT0 336 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 SELENOIQ9C0D9 397 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 C1orf123Q9NWV4 160 aa12.06□□□□□ -0.48
PRPF38A-201ENST00000257181 ZNFX1Q9P2E3 1918 aaKnown RBP12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 ZNF724A8MTY0 619 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 NBL1P41271 181 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 HBG1P69891 147 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 HBG2P69892 147 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 DUSP2Q05923 314 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 ZNF385BQ569K4 471 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 CATSPERDQ86XM0 798 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 CD300AQ9UGN4 299 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 MRPS18CQ9Y3D5 142 aaKnown RBP12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 P2RY14Q15391 338 aa12.05□□□□□ -0.48
PRPF38A-201ENST00000257181 LINC00596Q86U02 117 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms