RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 SEC61A2Q9H9S3 476 aa22.77■■□□□ 1.24
RAB40C-201ENST00000248139 SLC5A6Q9Y289 635 aa22.77■■□□□ 1.24
RAB40C-201ENST00000248139 TRBV11-1A0A0K0K1C0 115 aa22.77■■□□□ 1.24
RAB40C-201ENST00000248139 GLB1P16278 677 aa22.77■■□□□ 1.24
RAB40C-201ENST00000248139 KLK2P20151 261 aa22.77■■□□□ 1.24
RAB40C-201ENST00000248139 GSG1LQ6UXU4 331 aa22.77■■□□□ 1.24
RAB40C-201ENST00000248139 GPAT4Q86UL3 456 aa22.77■■□□□ 1.24
RAB40C-201ENST00000248139 C12orf45Q8N5I9 185 aaPredicted RBP22.77■■□□□ 1.24
RAB40C-201ENST00000248139 MFFQ9GZY8 342 aa22.77■■□□□ 1.24
RAB40C-201ENST00000248139 KLRF1Q9NZS2 232 aa22.77■■□□□ 1.24
RAB40C-201ENST00000248139 GDF2Q9UK05 429 aaPredicted RBP22.77■■□□□ 1.24
RAB40C-201ENST00000248139 TRAV14DV4A0A0A6YYC5 116 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 A0A1W2PNR3 127 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 LDLRAD4O15165 306 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 MBTPS2O43462 519 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 ATXN7L3Q14CW9 347 aaPredicted RBP22.76■■□□□ 1.23
RAB40C-201ENST00000248139 ZNF574Q6ZN55 896 aaPredicted RBP22.76■■□□□ 1.23
RAB40C-201ENST00000248139 ANKRD37Q7Z713 158 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 PAQR4Q8N4S7 273 aaPredicted RBP22.76■■□□□ 1.23
RAB40C-201ENST00000248139 STEAP2Q8NFT2 490 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 OR10S1Q8NGN2 331 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 OR13C9Q8NGT0 318 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 MS4A7Q9GZW8 240 aaPredicted RBP22.76■■□□□ 1.23
RAB40C-201ENST00000248139 SLC17A5Q9NRA2 495 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 TMEM200CA6NKL6 621 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 TPPPO94811 219 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 TTRP02766 147 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 HEXBP07686 556 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 FSTP19883 344 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 C4BPBP20851 252 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 PRKXP51817 358 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 CDNFQ49AH0 187 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 RGS7BPQ6MZT1 257 aaPredicted RBP22.76■■□□□ 1.23
RAB40C-201ENST00000248139 FJX1Q86VR8 437 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 TMEM229BQ8NBD8 167 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 PLPP5Q8NEB5 264 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 THRSPQ92748 146 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 SLAMF6Q96DU3 332 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 POTEKPQ9BYX7 375 aa22.76■■□□□ 1.23
RAB40C-201ENST00000248139 COL5A1P20908 1838 aaPredicted RBP22.76■■□□□ 1.23
RAB40C-201ENST00000248139 SDK2Q58EX2 2172 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 ANKUB1A6NFN9 424 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 OR6C76A6NM76 312 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 C17orf67Q0P5P2 114 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 UNC119Q13432 240 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 C3orf33Q6P1S2 294 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 CHST11Q9NPF2 352 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 RHBDD3Q9Y3P4 386 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 SIGLEC5O15389 551 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 RLN2P04090 185 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 ACHEP22303 614 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 SIGLEC14Q08ET2 396 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 DHRS2Q13268 280 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 TTYH1Q9H313 450 aaPredicted RBP22.75■■□□□ 1.23
RAB40C-201ENST00000248139 AKIRIN1Q9H9L7 192 aaPredicted RBP22.75■■□□□ 1.23
RAB40C-201ENST00000248139 KIF25Q9UIL4 384 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 VSIG4Q9Y279 399 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 CPED1A4D0V7 1026 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 OR6C65A6NJZ3 312 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 HMSDA8MTL9 139 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 B8ZZF3 427 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 KCNAB3O43448 404 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 GNB3P16520 340 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 TUSC1Q2TAM9 212 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 FAM74A1Q5RGS3 127 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 ZNF660Q6AZW8 331 aaPredicted RBP22.75■■□□□ 1.23
RAB40C-201ENST00000248139 PAPD4Q6PIY7 484 aaKnown RBP22.75■■□□□ 1.23
RAB40C-201ENST00000248139 CFAP77Q6ZQR2 320 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 NFAM1Q8NET5 270 aaPredicted RBP22.75■■□□□ 1.23
RAB40C-201ENST00000248139 CADM4Q8NFZ8 388 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 OR6C1Q96RD1 312 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 FSCN3Q9NQT6 498 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 SERINC1Q9NRX5 453 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 NUP50Q9UKX7 468 aa22.75■■□□□ 1.23
RAB40C-201ENST00000248139 CEP192Q8TEP8 1941 aa22.74■■□□□ 1.23
RAB40C-201ENST00000248139 DAP3P51398 398 aaKnown RBP22.74■■□□□ 1.23
RAB40C-201ENST00000248139 CXADRP78310 365 aa22.74■■□□□ 1.23
RAB40C-201ENST00000248139 TRAPPC6BQ86SZ2 158 aa22.74■■□□□ 1.23
RAB40C-201ENST00000248139 MFSD8Q8NHS3 518 aa22.74■■□□□ 1.23
RAB40C-201ENST00000248139 FAM206AQ9NX38 181 aa22.74■■□□□ 1.23
RAB40C-201ENST00000248139 ZNF814B7Z6K7 855 aa22.74■■□□□ 1.23
RAB40C-201ENST00000248139 RAB27BO00194 218 aa22.74■■□□□ 1.23
RAB40C-201ENST00000248139 GDF9O60383 454 aa22.74■■□□□ 1.23
RAB40C-201ENST00000248139 GFOD2Q3B7J2 385 aa22.74■■□□□ 1.23
RAB40C-201ENST00000248139 ZNF813Q6ZN06 617 aa22.74■■□□□ 1.23
RAB40C-201ENST00000248139 LYPD6Q86Y78 171 aa22.74■■□□□ 1.23
RAB40C-201ENST00000248139 ZNF584Q8IVC4 421 aa22.74■■□□□ 1.23
RAB40C-201ENST00000248139 OR10G3Q8NGC4 313 aa22.74■■□□□ 1.23
RAB40C-201ENST00000248139 NOP16Q9Y3C1 178 aaKnown RBP22.74■■□□□ 1.23
RAB40C-201ENST00000248139 MFSD2BA6NFX1 497 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 A6NIZ1 184 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 SYT7O43581 403 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 RAMP1O60894 148 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 ABOP16442 354 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 RAP1BP61224 184 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 RAP1AP62834 184 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 MYBPHQ13203 477 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 LCN10Q6JVE6 187 aa22.73■■□□□ 1.23
RAB40C-201ENST00000248139 ZNF704Q6ZNC4 412 aaPredicted RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms