RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 ECDO95905 644 aaPredicted RBP20.58■□□□□ 0.89
MSX2-201ENST00000239243 F10P00742 488 aa20.58■□□□□ 0.89
MSX2-201ENST00000239243 CD37P11049 281 aa20.58■□□□□ 0.89
MSX2-201ENST00000239243 HLA-DMAP28067 261 aa20.58■□□□□ 0.89
MSX2-201ENST00000239243 AP3S2P59780 193 aa20.58■□□□□ 0.89
MSX2-201ENST00000239243 SGCAQ16586 387 aa20.58■□□□□ 0.89
MSX2-201ENST00000239243 FAM166AQ6J272 317 aa20.58■□□□□ 0.89
MSX2-201ENST00000239243 SERPINA12Q8IW75 414 aa20.58■□□□□ 0.89
MSX2-201ENST00000239243 ZIC4Q8N9L1 334 aa20.58■□□□□ 0.89
MSX2-201ENST00000239243 FCAMRQ8WWV6 532 aa20.58■□□□□ 0.89
MSX2-201ENST00000239243 UPRTQ96BW1 309 aa20.58■□□□□ 0.89
MSX2-201ENST00000239243 ADGRG7Q96K78 797 aa20.58■□□□□ 0.89
MSX2-201ENST00000239243 ULBP2Q9BZM5 246 aa20.58■□□□□ 0.89
MSX2-201ENST00000239243 DPAGT1Q9H3H5 408 aa20.58■□□□□ 0.89
MSX2-201ENST00000239243 PARD6AQ9NPB6 346 aa20.58■□□□□ 0.89
MSX2-201ENST00000239243 COPZ2Q9P299 210 aa20.58■□□□□ 0.89
MSX2-201ENST00000239243 CFAP54Q96N23 3096 aa20.58■□□□□ 0.89
MSX2-201ENST00000239243 LOC100289279A0A1B0GTE1 492 aa20.58■□□□□ 0.88
MSX2-201ENST00000239243 CDK2P24941 298 aa20.58■□□□□ 0.88
MSX2-201ENST00000239243 PTH2RP49190 550 aa20.58■□□□□ 0.88
MSX2-201ENST00000239243 SRP9P49458 86 aaKnown RBP20.58■□□□□ 0.88
MSX2-201ENST00000239243 GFRA1P56159 465 aa20.58■□□□□ 0.88
MSX2-201ENST00000239243 TATDN3Q17R31 274 aa20.58■□□□□ 0.88
MSX2-201ENST00000239243 PLA1AQ53H76 456 aa20.58■□□□□ 0.88
MSX2-201ENST00000239243 RNASE12Q5GAN4 147 aaKnown RBP20.58■□□□□ 0.88
MSX2-201ENST00000239243 PRSS45Q7RTY3 260 aa20.58■□□□□ 0.88
MSX2-201ENST00000239243 C20orf196Q8IYI0 205 aa20.58■□□□□ 0.88
MSX2-201ENST00000239243 GJC3Q8NFK1 279 aa20.58■□□□□ 0.88
MSX2-201ENST00000239243 OR51D1Q8NGF3 324 aa20.58■□□□□ 0.88
MSX2-201ENST00000239243 OR6M1Q8NGM8 313 aa20.58■□□□□ 0.88
MSX2-201ENST00000239243 FAM3DQ96BQ1 224 aa20.58■□□□□ 0.88
MSX2-201ENST00000239243 FOXRED1Q96CU9 486 aaPredicted RBP20.58■□□□□ 0.88
MSX2-201ENST00000239243 AHCTF1Q8WYP5 2266 aa20.58■□□□□ 0.88
MSX2-201ENST00000239243 A0A1B0GVI7 797 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 RER1O15258 196 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 KRT33AO76009 404 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 POU3F4P49335 361 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 SELENOPP49908 381 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 CAPZA1P52907 286 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 OR1C1Q15619 314 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 SIAH3Q8IW03 269 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 PLPP7Q8NBV4 271 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 CPNE4Q96A23 557 aaPredicted RBP20.57■□□□□ 0.88
MSX2-201ENST00000239243 SIGLEC12Q96PQ1 595 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 ZNF416Q9BWM5 594 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 PNRC2Q9NPJ4 139 aaKnown RBP20.57■□□□□ 0.88
MSX2-201ENST00000239243 DDX28Q9NUL7 540 aaKnown RBP20.57■□□□□ 0.88
MSX2-201ENST00000239243 ZNF221Q9UK13 617 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 PCNX2A6NKB5 2137 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 CXCL13O43927 109 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 HTR2CP28335 458 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 GDNFP39905 211 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 BTG1P62324 171 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 PHYHD1Q5SRE7 291 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 STPG1Q5TH74 334 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 ANKRD16Q6P6B7 361 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 OR6F1Q8NGZ6 308 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 OR10D3Q8NH80 312 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 AUNIPQ9H7T9 357 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 DIABLOQ9NR28 239 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 FLVCR1Q9Y5Y0 555 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 KNTC1P50748 2209 aa20.57■□□□□ 0.88
MSX2-201ENST00000239243 NCKAP5O14513 1909 aa20.56■□□□□ 0.88
MSX2-201ENST00000239243 INMT-MINDY4F8WBC2 141 aa20.56■□□□□ 0.88
MSX2-201ENST00000239243 ACOT7O00154 380 aa20.56■□□□□ 0.88
MSX2-201ENST00000239243 XRCC3O43542 346 aa20.56■□□□□ 0.88
MSX2-201ENST00000239243 TAS2R20P59543 309 aa20.56■□□□□ 0.88
MSX2-201ENST00000239243 KLF9Q13886 244 aaPredicted RBP20.56■□□□□ 0.88
MSX2-201ENST00000239243 ABLIM2Q6H8Q1 611 aa20.56■□□□□ 0.88
MSX2-201ENST00000239243 GLCCI1Q86VQ1 547 aa20.56■□□□□ 0.88
MSX2-201ENST00000239243 UBASH3BQ8TF42 649 aa20.56■□□□□ 0.88
MSX2-201ENST00000239243 PHF21AQ96BD5 680 aa20.56■□□□□ 0.88
MSX2-201ENST00000239243 RBM24Q9BX46 236 aaKnown RBP20.56■□□□□ 0.88
MSX2-201ENST00000239243 ZNF703Q9H7S9 590 aaPredicted RBP20.56■□□□□ 0.88
MSX2-201ENST00000239243 A0A0B4J293 547 aa20.55■□□□□ 0.88
MSX2-201ENST00000239243 HPNP05981 417 aa20.55■□□□□ 0.88
MSX2-201ENST00000239243 CTSSP25774 331 aa20.55■□□□□ 0.88
MSX2-201ENST00000239243 DDOSTP39656 456 aa20.55■□□□□ 0.88
MSX2-201ENST00000239243 C2orf76Q3KRA6 126 aa20.55■□□□□ 0.88
MSX2-201ENST00000239243 DEFB124Q8NES8 71 aa20.55■□□□□ 0.88
MSX2-201ENST00000239243 ZNF716A6NP11 495 aa20.55■□□□□ 0.88
MSX2-201ENST00000239243 DOK2O60496 412 aa20.55■□□□□ 0.88
MSX2-201ENST00000239243 GLSO94925 669 aaPredicted RBP20.55■□□□□ 0.88
MSX2-201ENST00000239243 GSTT2BP0CG30 244 aa20.55■□□□□ 0.88
MSX2-201ENST00000239243 BTCP35070 178 aa20.55■□□□□ 0.88
MSX2-201ENST00000239243 PRKXP51817 358 aa20.55■□□□□ 0.88
MSX2-201ENST00000239243 SNTB2Q13425 540 aaKnown RBP20.55■□□□□ 0.88
MSX2-201ENST00000239243 RBMX2Q9Y388 322 aaKnown RBP20.55■□□□□ 0.88
MSX2-201ENST00000239243 NUBP2Q9Y5Y2 271 aa20.55■□□□□ 0.88
MSX2-201ENST00000239243 LOC390937A0A1W2PQ73 354 aa20.54■□□□□ 0.88
MSX2-201ENST00000239243 FTH1P19P0C7X4 201 aa20.54■□□□□ 0.88
MSX2-201ENST00000239243 CX3CR1P49238 355 aa20.54■□□□□ 0.88
MSX2-201ENST00000239243 STARP49675 285 aa20.54■□□□□ 0.88
MSX2-201ENST00000239243 ZNF121P58317 390 aaPredicted RBP20.54■□□□□ 0.88
MSX2-201ENST00000239243 MRPS34P82930 218 aaKnown RBP20.54■□□□□ 0.88
MSX2-201ENST00000239243 GLYATL3Q5SZD4 288 aa20.54■□□□□ 0.88
MSX2-201ENST00000239243 OR52I2Q8NH67 350 aa20.54■□□□□ 0.88
MSX2-201ENST00000239243 NABP1Q96AH0 204 aa20.54■□□□□ 0.88
MSX2-201ENST00000239243 FGGYQ96C11 551 aa20.54■□□□□ 0.88
MSX2-201ENST00000239243 CACNA1HO95180 2353 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms